RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 PLK2Q9NYY3 685 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 CLEC4EQ9ULY5 219 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 RUVBL2Q9Y230 463 aaKnown RBP15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 FCF1Q9Y324 198 aaKnown RBP15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 RWDD3Q9Y3V2 267 aa15.51■□□□□ 0.07
THUMPD3-210ENST00000515662 LYPLA1O75608 230 aaPredicted RBP15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 MYL2P10916 166 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 ZNF140P52738 457 aaPredicted RBP15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 SLC12A2P55011 1212 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 RHOAP61586 193 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 NCALDP61601 193 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 UBE3AQ05086 875 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 TRAF2Q12933 501 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 ITGA9Q13797 1035 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 SWT1Q5T5J6 900 aaKnown RBP15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 RTL10Q7L3V2 364 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 MTDHQ86UE4 582 aaKnown RBP15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 LPCAT1Q8NF37 534 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 GPR150Q8NGU9 434 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 SH3RF2Q8TEC5 729 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 GPR78Q96P69 363 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 NDNQ99608 321 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 OLFM1Q99784 485 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 C2orf49Q9BVC5 232 aaPredicted RBP15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 ADGRE3Q9BY15 652 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 NLE1Q9NVX2 485 aaPredicted RBP15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 KCNK4Q9NYG8 393 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 HEY2Q9UBP5 337 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 MID2Q9UJV3 735 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 CCL26Q9Y258 94 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 NUMBLQ9Y6R0 609 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 A0A087X1B8 175 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 K7ERQ8 282 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 CD3EAPO15446 510 aaKnown RBP15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 DNAJC6O75061 913 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 MOSPD3O75425 235 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 FGF19O95750 216 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 GLP2RO95838 553 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 SBK3P0C264 359 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 PTPN2P17706 415 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 IRS1P35568 1242 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 LMAN2Q12907 356 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 DLG1Q12959 904 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 CAMK1Q14012 370 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 TAF1AQ15573 450 aaPredicted RBP15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 MDGA1Q8NFP4 955 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 FIBINQ8TAL6 211 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 RDH11Q8TC12 318 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 SMIM14Q96QK8 99 aa15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 CPSF2Q9P2I0 782 aaKnown RBP15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 MARCOQ9UEW3 520 aaPredicted RBP15.5■□□□□ 0.07
THUMPD3-210ENST00000515662 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 ANKRD66B4E2M5 251 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 TK2O00142 265 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 ARHGEF15O94989 841 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 KLHL2O95198 593 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 KITP10721 976 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 PSMA3P25788 255 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 ARRB2P32121 409 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 GLRBP48167 497 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 TEAD2Q15562 447 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 HSF5Q4G112 596 aaPredicted RBP15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 ATXN7L2Q5T6C5 722 aaPredicted RBP15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 RETSATQ6NUM9 610 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 ATG14Q6ZNE5 492 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 GLT6D1Q7Z4J2 308 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 PARP9Q8IXQ6 854 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 CMTM8Q8IZV2 173 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 NXNL1Q96CM4 212 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 CDKN2AIPNLQ96HQ2 116 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 KIAA1522Q9P206 1035 aaPredicted RBP15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 MTCL1Q9Y4B5 1905 aaKnown RBP15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 C5orf67F2Z3F1 127 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 GRM6O15303 877 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 DDX6P26196 483 aaKnown RBP eCLIP15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 ABCE1P61221 599 aaKnown RBP15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 SEMA3AQ14563 771 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 RALGPS1Q5JS13 557 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 SPDYAQ5MJ70 313 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 HECTD2Q5U5R9 776 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 LRRC8EQ6NSJ5 796 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 MRNIPQ6NTE8 343 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 ZYG11AQ6WRX3 759 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 CLNKQ7Z7G1 428 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 FSTL5Q8N475 847 aaPredicted RBP15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 OR4L1Q8NH43 312 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 RIN3Q8TB24 985 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 ACDQ96AP0 544 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 SKA1Q96BD8 255 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 TSPAN17Q96FV3 270 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 SCYL1Q96KG9 808 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 SORT1Q99523 831 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 CATSPERZQ9NTU4 200 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 OXSMQ9NWU1 459 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 ZFP69BQ9UJL9 534 aa15.49■□□□□ 0.07
THUMPD3-210ENST00000515662 TARM1B6A8C7 271 aa15.48■□□□□ 0.07
THUMPD3-210ENST00000515662 SMAD6O43541 496 aaKnown RBP15.48■□□□□ 0.07
THUMPD3-210ENST00000515662 TRIM13O60858 407 aa15.48■□□□□ 0.07
THUMPD3-210ENST00000515662 RHOP08100 348 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms