RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RPL26P61254 145 aaKnown RBP12.84□□□□□ -0.35
CLCN3-210ENST00000515420 TRAF2Q12933 501 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 MTM1Q13496 603 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 PDE1CQ14123 709 aaPredicted RBP12.84□□□□□ -0.35
CLCN3-210ENST00000515420 FZD2Q14332 565 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 IRF4Q15306 451 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 SLC14A2Q15849 920 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 PPP2R5EQ16537 467 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 ARMC12Q5T9G4 340 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 SPOCD1Q6ZMY3 1216 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 USP45Q70EL2 814 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 GATAD2AQ86YP4 633 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 NDUFAF2Q8N183 169 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 ADAMTS14Q8WXS8 1223 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 RNF25Q96BH1 459 aaPredicted RBP12.84□□□□□ -0.35
CLCN3-210ENST00000515420 TBATAQ96M53 351 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 B4GALT6Q9UBX8 382 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 FTSJ1Q9UET6 329 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 SALL4Q9UJQ4 1053 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 DNPEPQ9ULA0 475 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 RPL26L1Q9UNX3 145 aaKnown RBP12.84□□□□□ -0.35
CLCN3-210ENST00000515420 EFR3BQ9Y2G0 817 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 HEY1Q9Y5J3 304 aa12.84□□□□□ -0.35
CLCN3-210ENST00000515420 hCG_1818297A0A087WSY0 165 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 CCDC66A2RUB6 948 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 H3BM21 787 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 LZTS3O60299 673 aaPredicted RBP12.83□□□□□ -0.36
CLCN3-210ENST00000515420 PIAS2O75928 621 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 HLA-DQB2P05538 268 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 CDK4P11802 303 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 TNNT1P13805 278 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 DGKAP23743 735 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 VIPR1P32241 457 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 THOP1P52888 689 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 ITKQ08881 620 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 BNIP3Q12983 259 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 WSCD2Q2TBF2 565 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 MACC1Q6ZN28 852 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 RAB44Q7Z6P3 723 aaPredicted RBP12.83□□□□□ -0.36
CLCN3-210ENST00000515420 KIAA1328Q86T90 577 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 RAVER1Q8IY67 606 aaKnown RBP12.83□□□□□ -0.36
CLCN3-210ENST00000515420 SPC24Q8NBT2 197 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 ACRBPQ8NEB7 543 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 ARRDC2Q8TBH0 407 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 PDCD6IPQ8WUM4 868 aaKnown RBP12.83□□□□□ -0.36
CLCN3-210ENST00000515420 BTN2A2Q8WVV5 523 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 SCRN2Q96FV2 425 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 LGMNQ99538 433 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 TDRD1Q9BXT4 1180 aaKnown RBP12.83□□□□□ -0.36
CLCN3-210ENST00000515420 LACRTQ9GZZ8 138 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 GOLPH3Q9H4A6 298 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 TOR4AQ9NXH8 423 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 TFR2Q9UP52 801 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 PCDHGA1Q9Y5H4 931 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 RAI2Q9Y5P3 530 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 CSNK1G3Q9Y6M4 447 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 LRP4O75096 1905 aa12.83□□□□□ -0.36
CLCN3-210ENST00000515420 TTC24A2A3L6 582 aaPredicted RBP12.82□□□□□ -0.36
CLCN3-210ENST00000515420 FAM221BA6H8Z2 402 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 NEMP2A6NFY4 417 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 MTSS1O43312 755 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 CST8O60676 142 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 RECQL5O94762 991 aaPredicted RBP12.82□□□□□ -0.36
CLCN3-210ENST00000515420 HEXIM1O94992 359 aaKnown RBP12.82□□□□□ -0.36
CLCN3-210ENST00000515420 LDOC1O95751 146 aaPredicted RBP12.82□□□□□ -0.36
CLCN3-210ENST00000515420 HOXC4P09017 264 aaPredicted RBP12.82□□□□□ -0.36
CLCN3-210ENST00000515420 C1SP09871 688 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 ZNF30P17039 623 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 CTNNA2P26232 953 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 PTPN7P35236 360 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 DSC2Q02487 901 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 AP1B1Q10567 949 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 KIF5AQ12840 1032 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 FOXC1Q12948 553 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 ZNF211Q13398 564 aaPredicted RBP12.82□□□□□ -0.36
CLCN3-210ENST00000515420 PRKD1Q15139 912 aaPredicted RBP12.82□□□□□ -0.36
CLCN3-210ENST00000515420 HS1BP3Q53T59 392 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 ESRP1Q6NXG1 681 aaKnown RBP12.82□□□□□ -0.36
CLCN3-210ENST00000515420 SYCE1Q8N0S2 351 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 CBARPQ8N350 705 aaPredicted RBP12.82□□□□□ -0.36
CLCN3-210ENST00000515420 LRRC57Q8N9N7 239 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 OR4C6Q8NH72 309 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 ATL2Q8NHH9 583 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 KIAA1524Q8TCG1 905 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 UBE2Q2Q8WVN8 375 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 PIH1D2Q8WWB5 315 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 P3H4Q92791 437 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 CNDP2Q96KP4 475 aaKnown RBP12.82□□□□□ -0.36
CLCN3-210ENST00000515420 COQ10AQ96MF6 247 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 DUSP23Q9BVJ7 150 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 MBNL1Q9NR56 388 aaKnown RBP12.82□□□□□ -0.36
CLCN3-210ENST00000515420 DNAJC28Q9NX36 388 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 NLGN3Q9NZ94 848 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 COQ6Q9Y2Z9 468 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 NEUROG3Q9Y4Z2 214 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 PCDHA3Q9Y5H8 950 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 DUSP10Q9Y6W6 482 aa12.82□□□□□ -0.36
CLCN3-210ENST00000515420 PTPRBP23467 1997 aa12.81□□□□□ -0.36
CLCN3-210ENST00000515420 TPRP12270 2363 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms