RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 PLA2G15Q8NCC3 412 aa15.12■□□□□ 0.01
DDR1-278ENST00000515233 ECHDC3Q96DC8 303 aa15.12■□□□□ 0.01
DDR1-278ENST00000515233 FOXP3Q9BZS1 431 aa15.12■□□□□ 0.01
DDR1-278ENST00000515233 SCN8AQ9UQD0 1980 aa15.12■□□□□ 0.01
DDR1-278ENST00000515233 UNC13CQ8NB66 2214 aa15.12■□□□□ 0.01
DDR1-278ENST00000515233 TMEM202A6NGA9 273 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 TNFRSF10CO14798 259 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 KELP23276 732 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 NSUN2Q08J23 767 aaKnown RBP eCLIP15.11■□□□□ 0.01
DDR1-278ENST00000515233 SYCP1Q15431 976 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 CERCAMQ5T4B2 595 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 CFAP58Q5T655 872 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 KCTD16Q68DU8 428 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 DNAJC24Q6P3W2 148 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 LIPIQ6XZB0 460 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 SRLQ86TD4 932 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 CCNJLQ8IV13 435 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 TSEN2Q8NCE0 465 aaKnown RBP15.11■□□□□ 0.01
DDR1-278ENST00000515233 OR56A4Q8NGH8 313 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 FUBP1Q96AE4 644 aaKnown RBP15.11■□□□□ 0.01
DDR1-278ENST00000515233 PDXPQ96GD0 296 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 MCEEQ96PE7 176 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 AGPAT1Q99943 283 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 SLC39A8Q9C0K1 460 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 ATP13A3Q9H7F0 1226 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 CHMP5Q9NZZ3 219 aa15.11■□□□□ 0.01
DDR1-278ENST00000515233 ANKRD36A6QL64 1941 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 ARHGAP42A6NI28 874 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 EIF3CLB5ME19 914 aaKnown RBP15.1■□□□□ 0.01
DDR1-278ENST00000515233 CACNB4O00305 520 aaPredicted RBP15.1■□□□□ 0.01
DDR1-278ENST00000515233 NUDT21O43809 227 aaKnown RBP15.1■□□□□ 0.01
DDR1-278ENST00000515233 RECQL5O94762 991 aaPredicted RBP15.1■□□□□ 0.01
DDR1-278ENST00000515233 PCCBP05166 539 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 JMJD7P0C870 316 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 LIPCP11150 499 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 DESP17661 470 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 SERPINA4P29622 427 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 RGRP47804 291 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 PAPOLAP51003 745 aaKnown RBP15.1■□□□□ 0.01
DDR1-278ENST00000515233 TPI1P60174 286 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 POLR2LP62875 67 aaKnown RBP15.1■□□□□ 0.01
DDR1-278ENST00000515233 RALGDSQ12967 914 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 TCEA2Q15560 299 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 TGIF1Q15583 401 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 LINC00303Q3SY05 128 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 AFMIDQ63HM1 303 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 ACAD10Q6JQN1 1059 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 TAF8Q7Z7C8 310 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 JAMLQ86YT9 394 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 EXD3Q8N9H8 876 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 FAM46DQ8NEK8 389 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 NEK11Q8NG66 645 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 OR1E3Q8WZA6 343 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 SGF29Q96ES7 293 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 EIF3CQ99613 913 aaKnown RBP15.1■□□□□ 0.01
DDR1-278ENST00000515233 FANCLQ9NW38 375 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 LRIT1Q9P2V4 623 aa15.1■□□□□ 0.01
DDR1-278ENST00000515233 LRRC10BA6NIK2 292 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 TRAFD1O14545 582 aaPredicted RBP15.09■□□□□ 0.01
DDR1-278ENST00000515233 PALMO75781 387 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 ITGB2P05107 769 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 PRKCGP05129 697 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 HGFP14210 728 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 COPB1P53618 953 aaKnown RBP15.09■□□□□ 0.01
DDR1-278ENST00000515233 OGDHQ02218 1023 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 BCL2L1Q07817 233 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 HLTFQ14527 1009 aaKnown RBP eCLIP15.09■□□□□ 0.01
DDR1-278ENST00000515233 RFTN1Q14699 578 aaPredicted RBP15.09■□□□□ 0.01
DDR1-278ENST00000515233 C14orf28Q4W4Y0 310 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 DCUN1D2Q6PH85 259 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 USP53Q70EK8 1073 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 SPRED1Q7Z699 444 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 MCOLN2Q8IZK6 566 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 SPOCK2Q92563 424 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 CELF6Q96J87 481 aaKnown RBP15.09■□□□□ 0.01
DDR1-278ENST00000515233 CMKLR1Q99788 373 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 B3GNT4Q9C0J1 378 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 TMEM168Q9H0V1 697 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 CLMPQ9H6B4 373 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 FGF22Q9HCT0 170 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 SEPT10Q9P0V9 454 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 PISDQ9UG56 409 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 LOXL2Q9Y4K0 774 aa15.09■□□□□ 0.01
DDR1-278ENST00000515233 PDE2AO00408 941 aaPredicted RBP15.08■□□□□ 0
DDR1-278ENST00000515233 SLC28A2O43868 658 aa15.08■□□□□ 0
DDR1-278ENST00000515233 ELFN1P0C7U0 828 aa15.08■□□□□ 0
DDR1-278ENST00000515233 GM2AP17900 193 aa15.08■□□□□ 0
DDR1-278ENST00000515233 ITIH1P19827 911 aa15.08■□□□□ 0
DDR1-278ENST00000515233 KCNC4Q03721 635 aa15.08■□□□□ 0
DDR1-278ENST00000515233 IL10RBQ08334 325 aa15.08■□□□□ 0
DDR1-278ENST00000515233 ERMARDQ5T6L9 678 aa15.08■□□□□ 0
DDR1-278ENST00000515233 PNCKQ6P2M8 343 aa15.08■□□□□ 0
DDR1-278ENST00000515233 DPPA4Q7L190 304 aa15.08■□□□□ 0
DDR1-278ENST00000515233 C17orf82Q86X59 251 aaPredicted RBP15.08■□□□□ 0
DDR1-278ENST00000515233 DTX1Q86Y01 620 aa15.08■□□□□ 0
DDR1-278ENST00000515233 SLITRK4Q8IW52 837 aa15.08■□□□□ 0
DDR1-278ENST00000515233 Q8N9G6 341 aaPredicted RBP15.08■□□□□ 0
DDR1-278ENST00000515233 ERGIC2Q96RQ1 377 aa15.08■□□□□ 0
DDR1-278ENST00000515233 LGR4Q9BXB1 951 aa15.08■□□□□ 0
DDR1-278ENST00000515233 DPEP2Q9H4A9 486 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms