RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 RBM22Q9NW64 420 aaKnown RBP eCLIP8.4□□□□□ -1.06
CCL28-204ENST00000514421 DTLQ9NZJ0 730 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 DKK3Q9UBP4 350 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 MTRF1LQ9UGC7 380 aaKnown RBP8.4□□□□□ -1.06
CCL28-204ENST00000514421 EIF2B4Q9UI10 523 aaKnown RBP8.4□□□□□ -1.06
CCL28-204ENST00000514421 SLC6A14Q9UN76 642 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.4□□□□□ -1.06
CCL28-204ENST00000514421 SNX24Q9Y343 169 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 HEY1Q9Y5J3 304 aa8.4□□□□□ -1.06
CCL28-204ENST00000514421 DMDP11532 3685 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 THADAQ6YHU6 1953 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 A0A1B0GTW7 788 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.39□□□□□ -1.07
CCL28-204ENST00000514421 A0A1W2PPC4 97 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 MUSKO15146 869 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 BCAT2O15382 392 aaPredicted RBP8.39□□□□□ -1.07
CCL28-204ENST00000514421 AP1G1O43747 822 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 MFSD11O43934 449 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 SHOX2O60902 331 aaPredicted RBP8.39□□□□□ -1.07
CCL28-204ENST00000514421 PCDH8O95206 1070 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 JCHAINP01591 159 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 IGHV4-34P06331 123 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 SERPINF2P08697 491 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 TIMP2P16035 220 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 CR2P20023 1033 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 CD27P26842 260 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 MMP13P45452 471 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 RGRP47804 291 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 SUOXP51687 545 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 PLTPP55058 493 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 TAS2R38P59533 333 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 AP1S1P61966 158 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 POLR2LP62875 67 aaKnown RBP8.39□□□□□ -1.07
CCL28-204ENST00000514421 IRX4P78413 519 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 BCL2L1Q07817 233 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
CCL28-204ENST00000514421 PPIDQ08752 370 aaKnown RBP8.39□□□□□ -1.07
CCL28-204ENST00000514421 ZNF844Q08AG5 666 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 CALCOCO2Q13137 446 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 PPP1R7Q15435 360 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 TRIM61Q5EBN2 209 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 RALGPS1Q5JS13 557 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 KAZNQ674X7 775 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 HIBCHQ6NVY1 386 aaPredicted RBP8.39□□□□□ -1.07
CCL28-204ENST00000514421 PRR23CQ6ZRP0 262 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 CEP128Q6ZU80 1094 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 TRMT10CQ7L0Y3 403 aaKnown RBP8.39□□□□□ -1.07
CCL28-204ENST00000514421 CROCCP2Q86T23 111 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 CCDC13Q8IYE1 715 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 GOLGA6L1Q8N7Z2 621 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 SNX19Q92543 992 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 MAML1Q92585 1016 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 RTP4Q96DX8 246 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 EXOC2Q96KP1 924 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 NUDCD1Q96RS6 583 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 NUSAP1Q9BXS6 441 aaKnown RBP8.39□□□□□ -1.07
CCL28-204ENST00000514421 ATP13A3Q9H7F0 1226 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 TMBIM4Q9HC24 238 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 PCDH9Q9HC56 1237 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 HAUS2Q9NVX0 235 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 DNPEPQ9ULA0 475 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 PLAAQ9Y263 795 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 FADS3Q9Y5Q0 445 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 CABIN1Q9Y6J0 2220 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 CEP250Q9BV73 2442 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 CHD5Q8TDI0 1954 aa8.39□□□□□ -1.07
CCL28-204ENST00000514421 PI4KAP42356 2102 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 MYO15AQ9UKN7 3530 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.38□□□□□ -1.07
CCL28-204ENST00000514421 A0A1W2PQ67 120 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 A0A1W2PQU0 124 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 A6NNZ2 444 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 HMGB1P1B2RPK0 211 aaPredicted RBP8.38□□□□□ -1.07
CCL28-204ENST00000514421 PATE3B3GLJ2 98 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 SMAPO00193 183 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 NEMP1O14524 444 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 PPP1R12AO14974 1030 aaPredicted RBP8.38□□□□□ -1.07
CCL28-204ENST00000514421 AREL1O15033 823 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 LATO43561 262 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 TSPAN6O43657 245 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 RNGTTO60942 597 aaKnown RBP8.38□□□□□ -1.07
CCL28-204ENST00000514421 TCEA3O75764 348 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 NEBLO76041 1014 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 KRT14P02533 472 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 SYPP08247 313 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 ADRB3P13945 408 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 CCNB1P14635 433 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 TGM2P21980 687 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 XPAP23025 273 aaPredicted RBP8.38□□□□□ -1.07
CCL28-204ENST00000514421 SERPINA4P29622 427 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 PMS2P54278 862 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 DYNLT1P63172 113 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 RPS21P63220 83 aaKnown RBP8.38□□□□□ -1.07
CCL28-204ENST00000514421 RACK1P63244 317 aaKnown RBP8.38□□□□□ -1.07
CCL28-204ENST00000514421 SKOR1P84550 965 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 ITKQ08881 620 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 AP1B1Q10567 949 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 SNX1Q13596 522 aa8.38□□□□□ -1.07
CCL28-204ENST00000514421 NOMO1Q15155 1222 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms