RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 FSBPO95073 299 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 SNUPNO95149 360 aaKnown RBP8.4□□□□□ -1.06
RNF4-220ENST00000513578 KLHL2O95198 593 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 GLP2RO95838 553 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 SERPINE1P05121 402 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 SLC35E2BP0CK96 405 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 FGF3P11487 239 aaPredicted RBP8.4□□□□□ -1.06
RNF4-220ENST00000513578 CPA3P15088 417 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 GJA1P17302 382 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 SYN1P17600 705 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 LPOP22079 712 aaPredicted RBP8.4□□□□□ -1.06
RNF4-220ENST00000513578 SUOXP51687 545 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 ARSDP51689 593 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 KPNA2P52292 529 aaKnown RBP8.4□□□□□ -1.06
RNF4-220ENST00000513578 PTPN5P54829 565 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 PRAMEP78395 509 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 MPP1Q00013 466 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 SULT2A1Q06520 285 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 BST1Q10588 318 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 TRAF2Q12933 501 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 STX3Q13277 289 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 CTBP1Q13363 440 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 GPM6BQ13491 265 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 GALNT3Q14435 633 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 PCLAFQ15004 111 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 CHI3L2Q15782 390 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 FASTKD1Q53R41 847 aaKnown RBP8.4□□□□□ -1.06
RNF4-220ENST00000513578 FAM91A1Q658Y4 838 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 FAM45BPQ6NSW5 357 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 AFTPHQ6ULP2 937 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 KDELC2Q7Z4H8 507 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 SDCCAG8Q86SQ7 713 aaPredicted RBP8.4□□□□□ -1.06
RNF4-220ENST00000513578 MFSD6LQ8IWD5 586 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 APCDD1Q8J025 514 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 PLD6Q8N2A8 252 aaKnown RBP8.4□□□□□ -1.06
RNF4-220ENST00000513578 TMEM151AQ8N4L1 468 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 TTC30BQ8N4P2 665 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 CCDC63Q8NA47 563 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 OR4L1Q8NH43 312 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 FAM45AQ8TCE6 357 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 BLOC1S5Q8TDH9 187 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 SREK1Q8WXA9 508 aaKnown RBP8.4□□□□□ -1.06
RNF4-220ENST00000513578 STON2Q8WXE9 905 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 IRF7Q92985 503 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 HDAC10Q969S8 669 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 TCEAL4Q96EI5 215 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 TBATAQ96M53 351 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 TSNARE1Q96NA8 513 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 TUBGCP5Q96RT8 1024 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 OMDQ99983 421 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 FAM96AQ9H5X1 160 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 NMRAL1Q9HBL8 299 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 HCFC1R1Q9NWW0 138 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 INTS6Q9UL03 887 aaKnown RBP8.4□□□□□ -1.06
RNF4-220ENST00000513578 SLC39A10Q9ULF5 831 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 CHKBQ9Y259 395 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 PPIL1Q9Y3C6 166 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 SPO11Q9Y5K1 396 aa8.4□□□□□ -1.06
RNF4-220ENST00000513578 TRIOBPQ9H2D6 2365 aa8.4□□□□□ -1.07
RNF4-220ENST00000513578 CCDC189A1A4V9 331 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 CCDC162PA2VCL2 907 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 TMEM114B3SHH9 223 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 G3V2L1 256 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 GOLGA8TH3BQL2 631 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 TRAFD1O14545 582 aaPredicted RBP8.39□□□□□ -1.07
RNF4-220ENST00000513578 CD3EAPO15446 510 aaKnown RBP8.39□□□□□ -1.07
RNF4-220ENST00000513578 DNAJC6O75061 913 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 ZNF821O75541 412 aaPredicted RBP8.39□□□□□ -1.07
RNF4-220ENST00000513578 PGLSO95336 258 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 IGSF6O95976 241 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 GOT2P00505 430 aaKnown RBP8.39□□□□□ -1.07
RNF4-220ENST00000513578 PDHA1P08559 390 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 DLDP09622 509 aaKnown RBP8.39□□□□□ -1.07
RNF4-220ENST00000513578 NEFHP12036 1026 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 CD70P32970 193 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 SKIV2L2P42285 1042 aaKnown RBP8.39□□□□□ -1.07
RNF4-220ENST00000513578 HK2P52789 917 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 TAS2R39P59534 338 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 TMPRSS15P98073 1019 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 ASPHQ12797 758 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 KCNC3Q14003 757 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 DUSP6Q16828 381 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 SLC5A9Q2M3M2 681 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 PITRM1Q5JRX3 1037 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 ARMC12Q5T9G4 340 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 C16orf46Q6P387 395 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 ZYG11AQ6WRX3 759 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 CRLF3Q8IUI8 442 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 SLC41A1Q8IVJ1 513 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 CENPLQ8N0S6 344 aaPredicted RBP8.39□□□□□ -1.07
RNF4-220ENST00000513578 CELF5Q8N6W0 485 aaKnown RBP8.39□□□□□ -1.07
RNF4-220ENST00000513578 PCDH20Q8N6Y1 951 aaKnown RBP8.39□□□□□ -1.07
RNF4-220ENST00000513578 ACVR1CQ8NER5 493 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 MDGA1Q8NFP4 955 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 OR6P1Q8NGX9 317 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 PIH1D2Q8WWB5 315 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 RMDN1Q96DB5 314 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 DNAJC1Q96KC8 554 aaKnown RBP8.39□□□□□ -1.07
RNF4-220ENST00000513578 UBXN10Q96LJ8 280 aa8.39□□□□□ -1.07
RNF4-220ENST00000513578 GPR78Q96P69 363 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms