RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 SPA17Q15506 151 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 IFI16Q16666 785 aaKnown RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 DEFB133Q30KQ1 61 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 TMEM52BQ4KMG9 183 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 PRRT3Q5FWE3 981 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 TPRG1LQ5T0D9 272 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 TIGD7Q6NT04 549 aaPredicted RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 ENPP7Q6UWV6 458 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 RFX6Q8HWS3 928 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 HID1Q8IV36 788 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 CCDC50Q8IVM0 306 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 PHACTR4Q8IZ21 702 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 RBFAQ8N0V3 343 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 SLC25A45Q8N413 288 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 PGBD5Q8N414 524 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 TP53I13Q8NBR0 393 aaPredicted RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 ZNF548Q8NEK5 533 aaPredicted RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 OR4C6Q8NH72 309 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 HCAR2Q8TDS4 363 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 ASB12Q8WXK4 309 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 RFFLQ8WZ73 363 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 RAPGEF5Q92565 580 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 TSACCQ96A04 125 aaPredicted RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 VOPP1Q96AW1 172 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 RNF25Q96BH1 459 aaPredicted RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 CENPTQ96BT3 561 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 CRELD1Q96HD1 420 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 NUDCD1Q96RS6 583 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 IL12RB2Q99665 862 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 SEMA3CQ99985 751 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 POLR1EQ9GZS1 481 aaKnown RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 SUDS3Q9H7L9 328 aaPredicted RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 SYNDIG1Q9H7V2 258 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 NOD2Q9HC29 1040 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 LUC7LQ9NQ29 371 aaKnown RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 EVA1BQ9NVM1 165 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 SEPT10Q9P0V9 454 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 MOSPD1Q9UJG1 213 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 INTUQ9ULD6 942 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 REXO2Q9Y3B8 237 aaKnown RBP6.54□□□□□ -1.36
KDM3B-208ENST00000512928 ZFYVE26Q68DK2 2539 aa6.54□□□□□ -1.36
KDM3B-208ENST00000512928 PTPRBP23467 1997 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CPED1A4D0V7 1026 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 TMEM8BA6NDV4 472 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 K7ESM1 405 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 KCNK1O00180 336 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CACNB4O00305 520 aaPredicted RBP6.53□□□□□ -1.36
KDM3B-208ENST00000512928 TRAFD1O14545 582 aaPredicted RBP6.53□□□□□ -1.36
KDM3B-208ENST00000512928 APOL1O14791 398 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 MATN3O15232 486 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 RECQL5O94762 991 aaPredicted RBP6.53□□□□□ -1.36
KDM3B-208ENST00000512928 PEX11BO96011 259 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CSF2P04141 144 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 ALPIP09923 528 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CYP2A6P11509 494 aaPredicted RBP6.53□□□□□ -1.36
KDM3B-208ENST00000512928 KRT10P13645 584 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CTSEP14091 401 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CCNB1P14635 433 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 MX2P20592 715 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CA4P22748 312 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 VIPR1P32241 457 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CYLC1P35663 651 aaPredicted RBP6.53□□□□□ -1.36
KDM3B-208ENST00000512928 ARHGAP25P42331 645 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 MAGEA1P43355 309 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 ARSEP51690 589 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 HADHBP55084 474 aaKnown RBP6.53□□□□□ -1.36
KDM3B-208ENST00000512928 GSDMDP57764 484 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 YPEL5P62699 121 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CCZ1BP86790 482 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CCZ1P86791 482 aaPredicted RBP6.53□□□□□ -1.36
KDM3B-208ENST00000512928 DSC2Q02487 901 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 PPARDQ03181 441 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 GALNT2Q10471 571 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 AP1B1Q10567 949 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 TRAF2Q12933 501 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 RALGDSQ12967 914 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 EIF2B5Q13144 721 aaKnown RBP6.53□□□□□ -1.36
KDM3B-208ENST00000512928 ZNF211Q13398 564 aaPredicted RBP6.53□□□□□ -1.36
KDM3B-208ENST00000512928 PAFAH1B3Q15102 231 aaKnown RBP6.53□□□□□ -1.36
KDM3B-208ENST00000512928 LLGL1Q15334 1064 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CDKN3Q16667 212 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 WSCD2Q2TBF2 565 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 ARMC12Q5T9G4 340 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 HES3Q5TGS1 186 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 KAZNQ674X7 775 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CRTC1Q6UUV9 634 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 RAD9BQ6WBX8 426 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CCNI2Q6ZMN8 369 aaPredicted RBP6.53□□□□□ -1.36
KDM3B-208ENST00000512928 MACC1Q6ZN28 852 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 USP45Q70EL2 814 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 DPPA4Q7L190 304 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 TMPRSS7Q7RTY8 843 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 KANSL1Q7Z3B3 1105 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 RHOT1Q8IXI2 618 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CCDC13Q8IYE1 715 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 CCDC170Q8IYT3 715 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 NDUFAF2Q8N183 169 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 PQLC3Q8N755 202 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 PLA2G15Q8NCC3 412 aa6.53□□□□□ -1.36
KDM3B-208ENST00000512928 MDM1Q8TC05 714 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms