RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 NEURL1O76050 574 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 DDAH2O95865 285 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 ADAP00813 363 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 CD4P01730 458 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 ZNF8P17098 575 aaPredicted RBP4.44□□□□□ -1.7
HTT-210ENST00000512909 ALDH1B1P30837 517 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 ABCD1P33897 745 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 PTGER1P34995 402 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 DPP6P42658 865 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 ALDH7A1P49419 539 aaKnown RBP4.44□□□□□ -1.7
HTT-210ENST00000512909 ENTPD1P49961 510 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 BLKP51451 505 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 ARSFP54793 590 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 TMPRSS3P57727 454 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 NANOS3P60323 173 aaKnown RBP4.44□□□□□ -1.7
HTT-210ENST00000512909 C1QTNF8P60827 252 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 MRPS21P82921 87 aaKnown RBP4.44□□□□□ -1.7
HTT-210ENST00000512909 CFHR1Q03591 330 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 ZBTB16Q05516 673 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 ITGADQ13349 1161 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 KRT32Q14532 448 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 SMTNL2Q2TAL5 461 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 SUPT20HL1Q3ZLR7 823 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 ENTPD8Q5MY95 495 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 CCDC30Q5VVM6 783 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 SUSD4Q5VX71 490 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 HAUS3Q68CZ6 603 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 FAM180BQ6P0A1 224 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 TMEM81Q6P7N7 255 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 KLHL24Q6TFL4 600 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 CLEC4GQ6UXB4 293 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 FAM160B2Q86V87 743 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 DIS3L2Q8IYB7 885 aaKnown RBP4.44□□□□□ -1.7
HTT-210ENST00000512909 PDILTQ8N807 584 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 SETD9Q8NE22 299 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 RASSF8Q8NHQ8 419 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.44□□□□□ -1.7
HTT-210ENST00000512909 DPF1Q92782 380 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 KAT2AQ92830 837 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 ZBTB10Q96DT7 871 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 ELP4Q96EB1 424 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 C7orf26Q96N11 449 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 UTP14AQ9BVJ6 771 aaKnown RBP4.44□□□□□ -1.7
HTT-210ENST00000512909 NYXQ9GZU5 481 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 IL21RQ9HBE5 538 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 ATP8A2Q9NTI2 1148 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 TRMT112Q9UI30 125 aaKnown RBP4.44□□□□□ -1.7
HTT-210ENST00000512909 SARDHQ9UL12 918 aa4.44□□□□□ -1.7
HTT-210ENST00000512909 ANKRD26Q9UPS8 1709 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 CEMIPQ8WUJ3 1361 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 ZMYM2Q9UBW7 1377 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 TARSL2A2RTX5 802 aaKnown RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 FAM90A7PA6NKC0 464 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 FAM90A22PA8MWA6 464 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 FAM90A12PA8MX19 464 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 FAM90A23PA8MXZ1 464 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 B4E171 279 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 ERVV-1B6SEH8 477 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 ZBED4O75132 1171 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 TBX18O95935 607 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 FGBP02675 491 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 URODP06132 367 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 GALTP07902 379 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 NFKBIAP25963 317 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 TSPAN7P41732 249 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 PTPN9P43378 593 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 ME1P48163 572 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 NR1H2P55055 460 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 PDE1CQ14123 709 aaPredicted RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 DAZAP2Q15038 168 aaPredicted RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 INPP5JQ15735 1006 aaPredicted RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 TSTQ16762 297 aaKnown RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 GSTA3Q16772 222 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 HIST2H2ACQ16777 129 aaPredicted RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 MORN5Q5VZ52 161 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 SERPINA11Q86U17 422 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 HORMAD2Q8N7B1 307 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 TDRD7Q8NHU6 1098 aaKnown RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 PIGOQ8TEQ8 1089 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 TMEM174Q8WUU8 243 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 RNF183Q96D59 192 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 KLHL15Q96M94 604 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 NLRP4Q96MN2 994 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 BBS4Q96RK4 519 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 GFM1Q96RP9 751 aaKnown RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 WDR83Q9BRX9 315 aaKnown RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 GATA5Q9BWX5 397 aaPredicted RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 SLC29A3Q9BZD2 475 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 NUF2Q9BZD4 464 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 LMAN2LQ9H0V9 348 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 TTYH1Q9H313 450 aaPredicted RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 PRDM13Q9H4Q3 707 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 MLXIPLQ9NP71 852 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 FZD3Q9NPG1 666 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 PNRC2Q9NPJ4 139 aaKnown RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 TUBA8Q9NY65 449 aaPredicted RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 FBXO2Q9UK22 296 aaPredicted RBP4.43□□□□□ -1.7
HTT-210ENST00000512909 COG5Q9UP83 839 aa4.43□□□□□ -1.7
HTT-210ENST00000512909 FAM96BQ9Y3D0 163 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms