RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 FERP16591 822 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 NFKBIAP25963 317 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 CD82P27701 267 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 SERPINA4P29622 427 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 UGT1A5P35504 534 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 MMP12P39900 470 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 LIG3P49916 1009 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 PDX1P52945 283 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 RPL7AP62424 266 aaKnown RBP12.65□□□□□ -0.38
VEGFA-216ENST00000512683 ZFP36L1Q07352 338 aaKnown RBP12.65□□□□□ -0.38
VEGFA-216ENST00000512683 AFMIDQ63HM1 303 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 CAVIN1Q6NZI2 390 aaKnown RBP12.65□□□□□ -0.38
VEGFA-216ENST00000512683 DNAJC24Q6P3W2 148 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 LEKR1Q6ZMV7 388 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 OR56A4Q8NGH8 313 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 PCDH19Q8TAB3 1148 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 TSACCQ96A04 125 aaPredicted RBP12.65□□□□□ -0.38
VEGFA-216ENST00000512683 FUCA2Q9BTY2 467 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 WRAP53Q9BUR4 548 aaKnown RBP12.65□□□□□ -0.38
VEGFA-216ENST00000512683 NAT10Q9H0A0 1025 aaKnown RBP12.65□□□□□ -0.38
VEGFA-216ENST00000512683 PDFQ9HBH1 243 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 TAS2R14Q9NYV8 317 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 LHX3Q9UBR4 397 aa12.65□□□□□ -0.38
VEGFA-216ENST00000512683 SETXQ7Z333 2677 aaKnown RBP12.65□□□□□ -0.38
VEGFA-216ENST00000512683 LRRK1Q38SD2 2015 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 D6RAR5 112 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 INSIG1O15503 277 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 CCP110O43303 1012 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 NUDT21O43809 227 aaKnown RBP12.64□□□□□ -0.39
VEGFA-216ENST00000512683 CREB3O43889 395 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 ITIH2P19823 946 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 SLC5A2P31639 672 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 HCAR3P49019 387 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 RENBPP51606 427 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 CCL7P80098 99 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 IQCB1Q15051 598 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 CERCAMQ5T4B2 595 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 ACAD10Q6JQN1 1059 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 DCUN1D2Q6PH85 259 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 CRTC1Q6UUV9 634 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 SRLQ86TD4 932 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 MCOLN2Q8IZK6 566 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 PYROXD2Q8N2H3 581 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 LZTR1Q8N653 840 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 CCDC74AQ96AQ1 378 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 ECHDC3Q96DC8 303 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 NAP1L5Q96NT1 182 aaPredicted RBP12.64□□□□□ -0.39
VEGFA-216ENST00000512683 CMKLR1Q99788 373 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 KLC2Q9H0B6 622 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 SEPT11Q9NVA2 429 aaKnown RBP12.64□□□□□ -0.39
VEGFA-216ENST00000512683 AKAP7Q9P0M2 348 aaPredicted RBP12.64□□□□□ -0.39
VEGFA-216ENST00000512683 MYO6Q9UM54 1294 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 ANKRD36A6QL64 1941 aa12.64□□□□□ -0.39
VEGFA-216ENST00000512683 COL6A6A6NMZ7 2263 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 MYLKQ15746 1914 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.63□□□□□ -0.39
VEGFA-216ENST00000512683 A0A1W2PQC6 194 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 A0A1W2PQM1 296 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 SMTNL1A8MU46 457 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 BUB1BO60566 1050 aaPredicted RBP12.63□□□□□ -0.39
VEGFA-216ENST00000512683 PALMO75781 387 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 RPLP0P05388 317 aaKnown RBP12.63□□□□□ -0.39
VEGFA-216ENST00000512683 JMJD7P0C870 316 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 LIPCP11150 499 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 ZNF165P49910 485 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 TPI1P60174 286 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 AP1S1P61966 158 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 OGDHQ02218 1023 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 BCL2L1Q07817 233 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 TMEM164Q5U3C3 297 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 E4F1Q66K89 784 aaPredicted RBP12.63□□□□□ -0.39
VEGFA-216ENST00000512683 FOXR1Q6PIV2 292 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 USP53Q70EK8 1073 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 RD3Q7Z3Z2 195 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 TAF8Q7Z7C8 310 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 CAMK1DQ8IU85 385 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 CCNJLQ8IV13 435 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 KYQ8NBH2 561 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 FAM46DQ8NEK8 389 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 KIAA1524Q8TCG1 905 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 SGF29Q96ES7 293 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 ZNF599Q96NL3 588 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 MCEEQ96PE7 176 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 SEMA3CQ99985 751 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 EPB41L5Q9HCM4 733 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 PARVAQ9NVD7 372 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 OR1A2Q9Y585 309 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 PCDHB11Q9Y5F2 797 aa12.63□□□□□ -0.39
VEGFA-216ENST00000512683 A0A1B0GTH6 734 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 LRRC53A6NM62 1247 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-216ENST00000512683 J3KR12 359 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 EFSO43281 561 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 NOBOXO60393 691 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 RECQL5O94762 991 aaPredicted RBP12.62□□□□□ -0.39
VEGFA-216ENST00000512683 PIGNO95427 931 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 TEAD1P28347 426 aa12.62□□□□□ -0.39
VEGFA-216ENST00000512683 HSPA9P38646 679 aaKnown RBP12.62□□□□□ -0.39
VEGFA-216ENST00000512683 PAPOLAP51003 745 aaKnown RBP12.62□□□□□ -0.39
VEGFA-216ENST00000512683 KCNC4Q03721 635 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms