RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 NSMCE3Q96MG7 304 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 AGAP2Q99490 1192 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 OSBPL1AQ9BXW6 950 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 DCDC2Q9UHG0 476 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 EVLQ9UI08 416 aaPredicted RBP15.27■□□□□ 0.03
SCLT1-209ENST00000511426 FBXO5Q9UKT4 447 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 PHTF1Q9UMS5 762 aa15.27■□□□□ 0.03
SCLT1-209ENST00000511426 A0A0J9YYE9 177 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 GMNCA6NCL1 334 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 TRBC1P01850 177 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 PDHA1P08559 390 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 HMGCLP35914 325 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 LEPRP48357 1165 aaKnown RBP15.26■□□□□ 0.03
SCLT1-209ENST00000511426 CD151P48509 253 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 CLCN5P51795 746 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 ST8SIA6P61647 398 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 POLR2LP62875 67 aaKnown RBP15.26■□□□□ 0.03
SCLT1-209ENST00000511426 ZNF470Q6ECI4 717 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 KYAT3Q6YP21 454 aaKnown RBP15.26■□□□□ 0.03
SCLT1-209ENST00000511426 RGS9BPQ6ZS82 235 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 NUDT18Q6ZVK8 323 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 CILP2Q8IUL8 1156 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 ANKRD42Q8N9B4 389 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 PIH1D2Q8WWB5 315 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 CKAP2Q8WWK9 683 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 ASIC4Q96FT7 647 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 MSLNLQ96KJ4 702 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 RPL10LQ96L21 214 aaKnown RBP15.26■□□□□ 0.03
SCLT1-209ENST00000511426 MAGEB18Q96M61 343 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 TCF12Q99081 682 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 VPS11Q9H270 941 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.26■□□□□ 0.03
SCLT1-209ENST00000511426 SLC2A6Q9UGQ3 507 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 GRID1Q9ULK0 1009 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 MYO7AQ13402 2215 aa15.26■□□□□ 0.03
SCLT1-209ENST00000511426 CAPN8A6NHC0 703 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 TBX10O75333 385 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 ALDOAP04075 364 aaKnown RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 TYK2P29597 1187 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 RPA3P35244 121 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 CTSOP43234 321 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 NUMBP49757 651 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 STK19P49842 368 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 CCNHP51946 323 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 PTPN5P54829 565 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 RUNX3Q13761 415 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 BMPR2Q13873 1038 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 MPP2Q14168 576 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 GEN1Q17RS7 908 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 AARS2Q5JTZ9 985 aaKnown RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 TRIM68Q6AZZ1 485 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 TANGO2Q6ICL3 276 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 BRAT1Q6PJG6 821 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 CHRDL2Q6WN34 429 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 SDCCAG8Q86SQ7 713 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 RNF135Q8IUD6 432 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 SUGP1Q8IWZ8 645 aaKnown RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 TCP10LQ8TDR4 215 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 PDCD6IPQ8WUM4 868 aaKnown RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 HDAC10Q969S8 669 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 CHMP6Q96FZ7 201 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 CDKN2AIPNLQ96HQ2 116 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 MRGPRX3Q96LB0 322 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 EBF3Q9H4W6 596 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 SUV39H2Q9H5I1 410 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 INTS10Q9NVR2 710 aaKnown RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 ELOVL2Q9NXB9 296 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 EPS15L1Q9UBC2 864 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 GGT7Q9UJ14 662 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 ANKRD6Q9Y2G4 727 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 PKP3Q9Y446 797 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 ARL5AQ9Y689 179 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 MTCH2Q9Y6C9 303 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 CHD9Q3L8U1 2897 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 CHD7Q9P2D1 2997 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 TPP1O14773 563 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 SPAG7O75391 227 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 FAM107AO95990 144 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 DHRS4L1P0CG22 281 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 COL6A2P12110 1019 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 ARSAP15289 507 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 SLC1A2P43004 574 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 POU4F1Q01851 419 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 TYSND1Q2T9J0 566 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 ACCSLQ4AC99 568 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 RNF187Q5TA31 235 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 HHATQ5VTY9 493 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 ZDHHC20Q5W0Z9 365 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 TMEM215Q68D42 235 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 USP45Q70EL2 814 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 CAMK1DQ8IU85 385 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 RYBPQ8N488 228 aaPredicted RBP15.25■□□□□ 0.03
SCLT1-209ENST00000511426 TTC30BQ8N4P2 665 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 DCLK2Q8N568 766 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 NAT16Q8N8M0 369 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 SMRP1Q8NCR6 262 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 OR6P1Q8NGX9 317 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 OR4L1Q8NH43 312 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 FRS2Q8WU20 508 aa15.25■□□□□ 0.03
SCLT1-209ENST00000511426 UCMAQ8WVF2 138 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms