RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 HDAC8Q9BY41 377 aa13.54□□□□□ -0.24
LETM1-204ENST00000510940 PABPC3Q9H361 631 aaKnown RBP13.54□□□□□ -0.24
LETM1-204ENST00000510940 MFSD1Q9H3U5 465 aa13.54□□□□□ -0.24
LETM1-204ENST00000510940 TBC1D17Q9HA65 648 aa13.54□□□□□ -0.24
LETM1-204ENST00000510940 RAD18Q9NS91 495 aa13.54□□□□□ -0.24
LETM1-204ENST00000510940 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.54□□□□□ -0.24
LETM1-204ENST00000510940 HCN2Q9UL51 889 aa13.54□□□□□ -0.24
LETM1-204ENST00000510940 NCKAP1Q9Y2A7 1128 aa13.54□□□□□ -0.24
LETM1-204ENST00000510940 PKP3Q9Y446 797 aa13.54□□□□□ -0.24
LETM1-204ENST00000510940 TCAF1Q9Y4C2 921 aa13.54□□□□□ -0.24
LETM1-204ENST00000510940 COL6A3P12111 3177 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 CAPN8A6NHC0 703 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 C16orf96A6NNT2 1141 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 AVILO75366 819 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 CTSLP07711 333 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 PDHA1P08559 390 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 ABHD2P08910 425 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 FAM153BP0C7A2 387 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 ACADMP11310 421 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 TPH1P17752 444 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 CD72P21854 359 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 TARSP26639 723 aaKnown RBP13.53□□□□□ -0.24
LETM1-204ENST00000510940 GKP32189 559 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 SLC8A1P32418 973 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 STX2P32856 288 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 HADHAP40939 763 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 CHRNA4P43681 627 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 RPS9P46781 194 aaKnown RBP13.53□□□□□ -0.24
LETM1-204ENST00000510940 NEK3P51956 506 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 SATB1Q01826 763 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 ARHGEF7Q14155 803 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 FRG1Q14331 258 aaKnown RBP13.53□□□□□ -0.24
LETM1-204ENST00000510940 IHHQ14623 411 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 POU6F1Q14863 301 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 CST6Q15828 149 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 FAM153CQ494X1 144 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 SPANXN3Q5MJ09 141 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 CERCAMQ5T4B2 595 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 IER5LQ5T953 404 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 DENND2CQ68D51 928 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 CYS1Q717R9 158 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 ERN2Q76MJ5 926 aaKnown RBP13.53□□□□□ -0.24
LETM1-204ENST00000510940 SYT13Q7L8C5 426 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 CROCCP2Q86T23 111 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 KBTBD6Q86V97 674 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 UBLCP1Q8WVY7 318 aaPredicted RBP13.53□□□□□ -0.24
LETM1-204ENST00000510940 GPR63Q9BZJ6 419 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 ACBD3Q9H3P7 528 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 SYBUQ9NX95 663 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 KCTD5Q9NXV2 234 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 CHMP2BQ9UQN3 213 aa13.53□□□□□ -0.24
LETM1-204ENST00000510940 SPTBN5Q9NRC6 3674 aaKnown RBP13.52□□□□□ -0.25
LETM1-204ENST00000510940 A0A087WUV0 522 aaPredicted RBP13.52□□□□□ -0.25
LETM1-204ENST00000510940 SHISA7A6NL88 538 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 SLC7A4O43246 635 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 ADAM23O75077 832 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 C7P10643 843 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 CHRM1P11229 460 aaPredicted RBP13.52□□□□□ -0.25
LETM1-204ENST00000510940 LPOP22079 712 aaPredicted RBP13.52□□□□□ -0.25
LETM1-204ENST00000510940 VIPR1P32241 457 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 PSMD8P48556 350 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 PTPN5P54829 565 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 ILF2Q12905 390 aaKnown RBP13.52□□□□□ -0.25
LETM1-204ENST00000510940 CRY1Q16526 586 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 MSS51Q4VC12 460 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 BEND6Q5SZJ8 279 aaPredicted RBP13.52□□□□□ -0.25
LETM1-204ENST00000510940 FBXO38Q6PIJ6 1188 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 C3orf62Q6ZUJ4 267 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 HDXQ7Z353 690 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 TMPRSS6Q8IU80 811 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 ANKMY2Q8IV38 441 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 ZNF687Q8N1G0 1237 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 PJA1Q8NG27 643 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 GSDMBQ8TAX9 411 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 CDKL2Q92772 493 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 CLDN23Q96B33 292 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 SIPA1Q96FS4 1042 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 CFAP36Q96G28 342 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 C9orf72Q96LT7 481 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 PWWP2AQ96N64 755 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 NECAB3Q96P71 396 aaPredicted RBP13.52□□□□□ -0.25
LETM1-204ENST00000510940 MCCC1Q96RQ3 725 aaPredicted RBP13.52□□□□□ -0.25
LETM1-204ENST00000510940 OMDQ99983 421 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 TXLNGYQ9BZA5 131 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 CDH19Q9H159 772 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 CDC42EP4Q9H3Q1 356 aaKnown RBP13.52□□□□□ -0.25
LETM1-204ENST00000510940 MTG2Q9H4K7 406 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 VPS37BQ9H9H4 285 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 PPCSQ9HAB8 311 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 ZFYVE1Q9HBF4 777 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 SIT1Q9Y3P8 196 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 RPS6KL1Q9Y6S9 549 aa13.52□□□□□ -0.25
LETM1-204ENST00000510940 C1orf232A0A0U1RR37 186 aa13.51□□□□□ -0.25
LETM1-204ENST00000510940 A0A1W2PQF6 199 aa13.51□□□□□ -0.25
LETM1-204ENST00000510940 RGSL1A5PLK6 1076 aa13.51□□□□□ -0.25
LETM1-204ENST00000510940 MROH6A6NGR9 719 aa13.51□□□□□ -0.25
LETM1-204ENST00000510940 H0Y858 1186 aa13.51□□□□□ -0.25
LETM1-204ENST00000510940 PSMD11O00231 422 aa13.51□□□□□ -0.25
LETM1-204ENST00000510940 NEMP1O14524 444 aa13.51□□□□□ -0.25
LETM1-204ENST00000510940 STX7O15400 261 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms