RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CNTN5O94779 1100 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 SLC37A1P57057 533 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 GABPAQ06546 454 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 MVPQ14764 893 aaKnown RBP7.03□□□□□ -1.28
USP53-206ENST00000510737 WASHC2DQ5SRD0 308 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 MSANTD2Q6P1R3 559 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 PDXDC1Q6P996 788 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 LRIG3Q6UXM1 1119 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 SKAP1Q86WV1 359 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 PRR26Q8N8Z3 221 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 FAM47BQ8NA70 645 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 CLEC18CQ8NCF0 446 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 ELP5Q8TE02 316 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 SLITRK1Q96PX8 696 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 MAGEB5Q9BZ81 275 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 VCPKMTQ9H867 229 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 FSCN3Q9NQT6 498 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 CD207Q9UJ71 328 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 DDX49Q9Y6V7 483 aaKnown RBP7.03□□□□□ -1.28
USP53-206ENST00000510737 PTPRSQ13332 1948 aa7.03□□□□□ -1.28
USP53-206ENST00000510737 FANCIQ9NVI1 1328 aa7.02□□□□□ -1.28
USP53-206ENST00000510737 ANKRD11Q6UB99 2663 aaPredicted RBP7.02□□□□□ -1.29
USP53-206ENST00000510737 ABHD14A-ACY1A0A1B0GW23 586 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 DPPA5A6NC42 116 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 POM121BA6NF01 834 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 MPHOSPH10O00566 681 aaKnown RBP7.02□□□□□ -1.29
USP53-206ENST00000510737 ACOT8O14734 319 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 KPNA5O15131 536 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 WDR46O15213 610 aaKnown RBP7.02□□□□□ -1.29
USP53-206ENST00000510737 NBNO60934 754 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 NDST3O95803 873 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 CXCL10P02778 98 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 S100BP04271 92 aaPredicted RBP7.02□□□□□ -1.29
USP53-206ENST00000510737 ICAM3P32942 547 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 COPB2P35606 906 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 RRP1P56182 461 aaKnown RBP7.02□□□□□ -1.29
USP53-206ENST00000510737 CNTN2Q02246 1040 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 EGR4Q05215 589 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 TFCP2Q12800 502 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 SLC5A9Q2M3M2 681 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 P3H1Q32P28 736 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 KRTAP27-1Q3LI81 207 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 C7orf57Q8NEG2 295 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 LMO3Q8TAP4 145 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 CENPIQ92674 756 aaPredicted RBP7.02□□□□□ -1.29
USP53-206ENST00000510737 RPGRIP1Q96KN7 1286 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 NEUROD6Q96NK8 337 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 ABHD14AQ9BUJ0 271 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 ISCUQ9H1K1 167 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 MYO1AQ9UBC5 1043 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 Q9Y3F1 56 aa7.02□□□□□ -1.29
USP53-206ENST00000510737 FASNP49327 2511 aaKnown RBP7.01□□□□□ -1.29
USP53-206ENST00000510737 GPR179Q6PRD1 2367 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 BECN2A8MW95 431 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 FOXO6A8MYZ6 492 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 PAPSS2O95340 614 aaPredicted RBP7.01□□□□□ -1.29
USP53-206ENST00000510737 MYL4P12829 197 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 DSCR9P59020 149 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 GFOD2Q3B7J2 385 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 SNRNP48Q6IEG0 339 aaKnown RBP7.01□□□□□ -1.29
USP53-206ENST00000510737 USP17L6PQ6QN14 398 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 NR2C2APQ86WQ0 139 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 PAQR4Q8N4S7 273 aaPredicted RBP7.01□□□□□ -1.29
USP53-206ENST00000510737 TTC8Q8TAM2 541 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 WFIKKN2Q8TEU8 576 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 DNASE2BQ8WZ79 361 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 MAGEH1Q9H213 219 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 PRDM16Q9HAZ2 1276 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 PLK2Q9NYY3 685 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 MYO6Q9UM54 1294 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 FAM208BQ5VWN6 2430 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 TET1Q8NFU7 2136 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 COL11A1P12107 1806 aaPredicted RBP7.01□□□□□ -1.29
USP53-206ENST00000510737 IL16Q14005 1332 aa7.01□□□□□ -1.29
USP53-206ENST00000510737 SIP14410 1827 aa7□□□□□ -1.29
USP53-206ENST00000510737 A0A1W2PPC4 97 aa7□□□□□ -1.29
USP53-206ENST00000510737 GXYLT2A0PJZ3 443 aa7□□□□□ -1.29
USP53-206ENST00000510737 MYL3P08590 195 aa7□□□□□ -1.29
USP53-206ENST00000510737 NADSYN1Q6IA69 706 aa7□□□□□ -1.29
USP53-206ENST00000510737 NFRKBQ6P4R8 1299 aa7□□□□□ -1.29
USP53-206ENST00000510737 PARM1Q6UWI2 310 aa7□□□□□ -1.29
USP53-206ENST00000510737 TMEM179Q6ZVK1 233 aa7□□□□□ -1.29
USP53-206ENST00000510737 CUZD1Q86UP6 607 aa7□□□□□ -1.29
USP53-206ENST00000510737 DCLK2Q8N568 766 aa7□□□□□ -1.29
USP53-206ENST00000510737 FAM133AQ8N9E0 248 aa7□□□□□ -1.29
USP53-206ENST00000510737 MIGA1Q8NAN2 632 aa7□□□□□ -1.29
USP53-206ENST00000510737 KCNG4Q8TDN1 519 aa7□□□□□ -1.29
USP53-206ENST00000510737 GRAMD1AQ96CP6 724 aa7□□□□□ -1.29
USP53-206ENST00000510737 EIF3CQ99613 913 aaKnown RBP7□□□□□ -1.29
USP53-206ENST00000510737 NUDT22Q9BRQ3 303 aa7□□□□□ -1.29
USP53-206ENST00000510737 MTG1Q9BT17 334 aaPredicted RBP7□□□□□ -1.29
USP53-206ENST00000510737 PHF7Q9BWX1 381 aaPredicted RBP7□□□□□ -1.29
USP53-206ENST00000510737 TEX13BQ9BXU2 312 aa7□□□□□ -1.29
USP53-206ENST00000510737 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7□□□□□ -1.29
USP53-206ENST00000510737 TANC1Q9C0D5 1861 aa6.99□□□□□ -1.29
USP53-206ENST00000510737 INAFM1C9JVW0 142 aa6.99□□□□□ -1.29
USP53-206ENST00000510737 ATP2A1O14983 1001 aa6.99□□□□□ -1.29
USP53-206ENST00000510737 NPC1O15118 1278 aa6.99□□□□□ -1.29
USP53-206ENST00000510737 PI15O43692 258 aa6.99□□□□□ -1.29
USP53-206ENST00000510737 AKR1B1P15121 316 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms