RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 KCNK7Q9Y2U2 307 aa2.29□□□□□ -2.04
CAST-226ENST00000509529 SIT1Q9Y3P8 196 aa2.29□□□□□ -2.04
CAST-226ENST00000509529 PCDHA2Q9Y5H9 948 aa2.29□□□□□ -2.04
CAST-226ENST00000509529 TMEM2Q9UHN6 1383 aa2.29□□□□□ -2.04
CAST-226ENST00000509529 NRCAMQ92823 1304 aa2.29□□□□□ -2.04
CAST-226ENST00000509529 PQLC2LA1A4F0 135 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 ANKRD62A6NC57 917 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 GOLGA8JA6NMD2 632 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 CLDN25C9JDP6 229 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 GATCO43716 136 aaKnown RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 PRPSAP2O60256 369 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 NOS1APO75052 506 aaPredicted RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 H2AFYO75367 372 aaKnown RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 TADA2AO75478 443 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 PIAS1O75925 651 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 PLEKHA8P1O95397 391 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 TGM6O95932 706 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 F9P00740 461 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 ERBB2P04626 1255 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 GFAPP14136 432 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 IFNGR1P15260 489 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 ZNF28P17035 718 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 SLC9A1P19634 815 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 ITIH1P19827 911 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 GARTP22102 1010 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 HSPA1LP34931 641 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 HTR7P34969 479 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 RPL22P35268 128 aaKnown RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 SLC16A2P36021 539 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 PCYT1AP49585 367 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 HLCSP50747 726 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 BMXP51813 675 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 PMS1P54277 932 aaKnown RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 PRKAA2P54646 552 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 AQP4P55087 323 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 NLRP11P59045 1033 aaKnown RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 DCDC1P59894 354 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 SNRPFP62306 86 aaKnown RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 SMARCB1Q12824 385 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 GRM1Q13255 1194 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 KLF1Q13351 362 aaPredicted RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 THOC5Q13769 683 aaKnown RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 HLTFQ14527 1009 aaKnown RBP eCLIP2.28□□□□□ -2.04
CAST-226ENST00000509529 MORF4L2Q15014 288 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 TRADDQ15628 312 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 PSMD5Q16401 504 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 PKN2Q16513 984 aaKnown RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 IL17AQ16552 155 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 LRIT3Q3SXY7 679 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 NRN1LQ496H8 165 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 PLEKHG4Q58EX7 1191 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 DCAF6Q58WW2 860 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 NHSL2Q5HYW2 709 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 PITRM1Q5JRX3 1037 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 DNLZQ5SXM8 178 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 PRMT9Q6P2P2 845 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 ZNF782Q6ZMW2 699 aaPredicted RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 LPCAT2Q7L5N7 544 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 ATG9AQ7Z3C6 839 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 MIER3Q7Z3K6 550 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 CCDC25Q86WR0 208 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 CDR2LQ86X02 465 aaPredicted RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 CLEC4FQ8N1N0 589 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 TTLL6Q8N841 843 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 ZNF680Q8NEM1 530 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 SHCBP1Q8NEM2 672 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 OR7D4Q8NG98 312 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 FBXO25Q8TCJ0 367 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 SGCDQ92629 289 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 TFAP2CQ92754 450 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 NKD2Q969F2 451 aaPredicted RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 PPWD1Q96BP3 646 aaKnown RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 TAMM41Q96BW9 452 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 SUCLG2Q96I99 432 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 CDHR1Q96JP9 859 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 ASB16Q96NS5 453 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 FCRL3Q96P31 734 aaPredicted RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 SELENOSQ9BQE4 189 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 INTS2Q9H0H0 1204 aaKnown RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 LHX5Q9H2C1 402 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 C8orf33Q9H7E9 229 aaPredicted RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 SIX2Q9NPC8 291 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 NGRNQ9NPE2 291 aaKnown RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 PRDM8Q9NQV8 689 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 RGS18Q9NS28 235 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 C20orf96Q9NUD7 363 aaPredicted RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 ACOXLQ9NUZ1 547 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 CHPF2Q9P2E5 772 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 PSMC3IPQ9P2W1 217 aaPredicted RBP2.28□□□□□ -2.04
CAST-226ENST00000509529 EXTL2Q9UBQ6 330 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 EPHA6Q9UF33 1036 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 NAALADL1Q9UQQ1 740 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 RNF11Q9Y3C5 154 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 TRAF6Q9Y4K3 522 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 STRCP1A6NGW2 1772 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 COL18A1P39060 1754 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 SSC5DA1L4H1 1573 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 TCRBV3S1A0A5B6 114 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 ESYT3A0FGR9 886 aa2.28□□□□□ -2.04
CAST-226ENST00000509529 SNTNA6NMZ2 147 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms