RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 HGFACQ04756 655 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 KLC1Q07866 573 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 SLFN5Q08AF3 891 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 LMAN2Q12907 356 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CHAF1BQ13112 559 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 EIF3AQ14152 1382 aaKnown RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 SLC39A14Q15043 492 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 ZMYND11Q15326 602 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 RPS6KA2Q15349 733 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CHRNA6Q15825 494 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CYP2A13Q16696 494 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 KRTAP27-1Q3LI81 207 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 SLC9B1Q4ZJI4 515 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 PAN2Q504Q3 1202 aaKnown RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 SLC44A4Q53GD3 710 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 MAP3K21Q5TCX8 1036 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 E4F1Q66K89 784 aaPredicted RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 PTRHD1Q6GMV3 140 aaKnown RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF425Q6IV72 752 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 KLHL24Q6TFL4 600 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 SLC30A10Q6XR72 485 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 ADGRG6Q86SQ4 1221 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CDKL3Q8IVW4 592 aaPredicted RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 PLD5Q8N7P1 536 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 FAM133AQ8N9E0 248 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 OR13C2Q8NGS9 318 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 OR10Z1Q8NGY1 313 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 FIBINQ8TAL6 211 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 FANK1Q8TC84 345 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 METTL6Q8TCB7 284 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 DQX1Q8TE96 717 aaKnown RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 PARD3Q8TEW0 1356 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 PDCD6IPQ8WUM4 868 aaKnown RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 AUTS2Q8WXX7 1259 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 STAMQ92783 540 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 NKD1Q969G9 470 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 ZKSCAN4Q969J2 545 aaPredicted RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 HMCESQ96FZ2 354 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 REXO5Q96IC2 774 aaKnown RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CCDC42Q96M95 316 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 OPALINQ96PE5 141 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 TESK2Q96S53 571 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 PYM1Q9BRP8 204 aaKnown RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CCM2Q9BSQ5 444 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CNPPD1Q9BV87 410 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 MOV10L1Q9BXT6 1211 aaKnown RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 GPR61Q9BZJ8 451 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 DCLK3Q9C098 648 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 KLHL4Q9C0H6 718 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 TMEM60Q9H2L4 133 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 HIPK3Q9H422 1215 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 ATP13A3Q9H7F0 1226 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 PNPLA8Q9NP80 782 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 NRIP3Q9NQ35 241 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 SIRT3Q9NTG7 399 aaPredicted RBP4.59□□□□□ -1.67
NIPBL-206ENST00000509429 RAB20Q9NX57 234 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 VPS54Q9P1Q0 977 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 C5AR2Q9P296 337 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 TRIM10Q9UDY6 481 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 ZNRF3Q9ULT6 936 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 CLCA2Q9UQC9 943 aa4.59□□□□□ -1.67
NIPBL-206ENST00000509429 SPHKAPQ2M3C7 1700 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 KIAA1210Q9ULL0 1709 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 SAMD9LQ8IVG5 1584 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 NEURL4Q96JN8 1562 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 DUOX2Q9NRD8 1548 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 ZNF608Q9ULD9 1512 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-206ENST00000509429 CCDC144AA2RUR9 1427 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 PRAG1Q86YV5 1406 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 A0A1W2PPW3 197 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 TYW5A2RUC4 315 aaKnown RBP4.58□□□□□ -1.68
NIPBL-206ENST00000509429 DENND3A2RUS2 1198 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 A4D1N5 150 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 TMEM210A6NLX4 147 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 A8MXE2 369 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 GTPBP1O00178 669 aaKnown RBP4.58□□□□□ -1.68
NIPBL-206ENST00000509429 SH2B2O14492 632 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-206ENST00000509429 XPO1O14980 1071 aaKnown RBP4.58□□□□□ -1.68
NIPBL-206ENST00000509429 ANGPT2O15123 496 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 OGTO15294 1046 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 PCDHGA12O60330 932 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 CTAG2O75638 210 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 TUSC2O75896 110 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 MYO1DO94832 1006 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 CSH1P0DML2 217 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 CSH2P0DML3 217 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 MYBL1P10243 752 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 RARBP10826 455 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 ACADMP11310 421 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 CHRM3P20309 590 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 AKAP5P24588 427 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 PCSK1P29120 753 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 RRM2P31350 389 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 GP5P40197 560 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 GPR3P46089 330 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 PITPNBP48739 271 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 RGS7P49802 495 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 GNAQP50148 359 aa4.58□□□□□ -1.68
NIPBL-206ENST00000509429 ATXN3P54252 364 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-206ENST00000509429 MTTPP55157 894 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms