RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 TDRD9Q8NDG6 1382 aaKnown RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 CCDC196A0A1B0GTZ2 297 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 H0Y3Z8 333 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 H7C0S8 307 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 COQ9O75208 318 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 PGM3O95394 542 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 STARD3NLO95772 234 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 ALDOCP09972 364 aaKnown RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 PECAM1P16284 738 aaPredicted RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 NPPBP16860 134 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 IGFBP2P18065 325 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 EGR1P18146 543 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 RXRAP19793 462 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 IL11P20809 199 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 MUTP22033 750 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 SP100P23497 879 aaPredicted RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 ABCD3P28288 659 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 ATICP31939 592 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 CTNNA1P35221 906 aaKnown RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 CCR9P51686 369 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 LUMP51884 338 aaPredicted RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 AP2B1P63010 937 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 SHC2P98077 582 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 CDC16Q13042 620 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 CUL4AQ13619 759 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 PSMD6Q15008 389 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 SYT16Q17RD7 645 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 HECTD3Q5T447 861 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 RAP1GAP2Q684P5 730 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 RPUSD3Q6P087 351 aaKnown RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 NFRKBQ6P4R8 1299 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 TMEM88Q6PEY1 159 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 CRTC1Q6UUV9 634 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 PIK3AP1Q6ZUJ8 805 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 MDGA2Q7Z553 956 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 P2RY8Q86VZ1 359 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 GATAD2AQ86YP4 633 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 KLBQ86Z14 1044 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 GALNT13Q8IUC8 556 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 SLC44A2Q8IWA5 706 aaPredicted RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 TEX11Q8IYF3 940 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 NDUFAF2Q8N183 169 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 NGEFQ8N5V2 710 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 ZNF248Q8NDW4 579 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 CEP70Q8NHQ1 597 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 CEP76Q8TAP6 659 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 KCNG4Q8TDN1 519 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 TBC1D22AQ8WUA7 517 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 IP6K1Q92551 441 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 ATP6V1E2Q96A05 226 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 NSUN4Q96CB9 384 aaKnown RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 CDHR1Q96JP9 859 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 TIGD1Q96MW7 591 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 BAG1Q99933 345 aaPredicted RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 NUDT22Q9BRQ3 303 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 RTKNQ9BST9 563 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 USP44Q9H0E7 712 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 TAF1DQ9H5J8 278 aaPredicted RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 SEPSECSQ9HD40 501 aaKnown RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 HEYLQ9NQ87 328 aaPredicted RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 FBXO28Q9NVF7 368 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 CFDP1Q9UEE9 299 aaPredicted RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 ADD3Q9UEY8 706 aaKnown RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 ISY1Q9ULR0 285 aaKnown RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 DAPP1Q9UN19 280 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 UBE2J1Q9Y385 318 aaPredicted RBP2.16□□□□□ -2.06
XRCC4-204ENST00000509268 RAP2CQ9Y3L5 183 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 CYP46A1Q9Y6A2 500 aa2.16□□□□□ -2.06
XRCC4-204ENST00000509268 A0A1B0GVM2 712 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 PABPN1LA6NDY0 278 aaKnown RBP2.15□□□□□ -2.06
XRCC4-204ENST00000509268 AGAP14A8MT82 685 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 ZSCAN9O15535 394 aaPredicted RBP2.15□□□□□ -2.06
XRCC4-204ENST00000509268 DNPH1O43598 174 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 HSPA4LO95757 839 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 AFPP02771 609 aaKnown RBP2.15□□□□□ -2.06
XRCC4-204ENST00000509268 CLTBP09497 229 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 CNPP09543 421 aaKnown RBP2.15□□□□□ -2.06
XRCC4-204ENST00000509268 CETPP11597 493 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 CHMP24386 653 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 ADPRHP54922 357 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 ARF3P61204 181 aaPredicted RBP2.15□□□□□ -2.06
XRCC4-204ENST00000509268 IFI35P80217 286 aaPredicted RBP2.15□□□□□ -2.06
XRCC4-204ENST00000509268 ARF1P84077 181 aaKnown RBP2.15□□□□□ -2.06
XRCC4-204ENST00000509268 GALNT2Q10471 571 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 PPP2R5CQ13362 524 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 ACVR2BQ13705 512 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 MAPKAPK3Q16644 382 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 CTXN3Q4LDR2 81 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 TCTE1Q5JU00 501 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 VWA5B1Q5TIE3 1220 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 ARL6IP4Q66PJ3 421 aaKnown RBP2.15□□□□□ -2.06
XRCC4-204ENST00000509268 SLC22A25Q6T423 547 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 FAM47EQ6ZV65 393 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 TMTC3Q6ZXV5 915 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 RRAGAQ7L523 313 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 KRT74Q7RTS7 529 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 R3HCC1LQ7Z5L2 792 aaKnown RBP2.15□□□□□ -2.06
XRCC4-204ENST00000509268 ANKS1BQ7Z6G8 1248 aa2.15□□□□□ -2.06
XRCC4-204ENST00000509268 VSIG1Q86XK7 387 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms