RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TIGD7Q6NT04 549 aaPredicted RBP11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 BNC2Q6ZN30 1099 aaPredicted RBP11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 ZNF354CQ86Y25 554 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 HPS6Q86YV9 775 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 KLHDC8BQ8IXV7 354 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 PGAM4Q8N0Y7 254 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 SLC39A11Q8N1S5 342 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 CFAP52Q8N1V2 620 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 PQLC1Q8N2U9 271 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 PHTF2Q8N3S3 785 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 MARVELD2Q8N4S9 558 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 PHC3Q8NDX5 983 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 ADCY4Q8NFM4 1077 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 PTCD2Q8WV60 388 aaKnown RBP11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 PSMG2Q969U7 264 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 PABPC5Q96DU9 382 aaKnown RBP11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 LRGUKQ96M69 825 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 ZNF558Q96NG5 402 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 KLHL5Q96PQ7 755 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 AGAP2Q99490 1192 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 KIFC1Q9BW19 673 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 ACE2Q9BYF1 805 aaPredicted RBP11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 NACA2Q9H009 215 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 ATXN3LQ9H3M9 355 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 EFCAB1Q9HAE3 211 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 MRM3Q9HC36 420 aaKnown RBP11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 PLK2Q9NYY3 685 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 DTNAQ9Y4J8 743 aa11.09□□□□□ -0.63
SH3RF1-203ENST00000508685 EME2A4GXA9 379 aaPredicted RBP11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 ZNF840PA6NDX5 716 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 TRPC5OSA6NMA1 111 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 E9PBE3 544 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 H3BNX3 289 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 GOLGA8TH3BQL2 631 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 ZBTB14O43829 449 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 KLHL41O60662 606 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 PMPCBO75439 489 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 ABLIM3O94929 683 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 TFEBP19484 476 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 NDST2P52849 883 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 MAXP61244 160 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 WDR5P61964 334 aaKnown RBP11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 SLC10A7Q0GE19 358 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 USP4Q13107 963 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 PDK3Q15120 406 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 CNPY1Q3B7I2 92 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 NAPRTQ6XQN6 538 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 RNF111Q6ZNA4 994 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 ATG14Q6ZNE5 492 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 ATXN7L3BQ96GX2 97 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 FAR2Q96K12 515 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 FCRL5Q96RD9 977 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 TASP1Q9H6P5 420 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 PIDD1Q9HB75 910 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 AFF4Q9UHB7 1163 aaKnown RBP11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 CDYLQ9Y232 598 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 ABHD14A-ACY1A0A1B0GW23 586 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 TTC24A2A3L6 582 aaPredicted RBP11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 COCHO43405 550 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 NPHS1O60500 1241 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 OR1E1P30953 314 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 SLC6A4P31645 630 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 ATP5C1P36542 298 aaKnown RBP11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 ABCG1P45844 678 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 GRIA4P48058 902 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 FOLH1Q04609 750 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 ILF2Q12905 390 aaKnown RBP11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 MSLNQ13421 630 aaPredicted RBP11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 POU6F1Q14863 301 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 PCSK7Q16549 785 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 PCID2Q5JVF3 399 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 LPCAT4Q643R3 524 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 DENND5AQ6IQ26 1287 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 C7orf61Q8IZ16 206 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 AFAP1L2Q8N4X5 818 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 GABPB2Q8TAK5 448 aaPredicted RBP11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 STYXQ8WUJ0 223 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 CCDC124Q96CT7 223 aaKnown RBP11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 DDX50Q9BQ39 737 aaKnown RBP11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 TBL1YQ9BQ87 522 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 FICDQ9BVA6 458 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 ZNF358Q9NW07 568 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 COMMD8Q9NX08 183 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 UTP6Q9NYH9 597 aaKnown RBP11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 DNMT3LQ9UJW3 386 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 CNOT11Q9UKZ1 510 aaKnown RBP11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 ACOT9Q9Y305 439 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 YIPF1Q9Y548 306 aa11.08□□□□□ -0.64
SH3RF1-203ENST00000508685 C5orf42Q9H799 3197 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 C2orf78A6NCI8 922 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 DRGXA6NNA5 263 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 H0YJX3 145 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 RAMP2O60895 175 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 GJB3O75712 270 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 ANXA9O76027 345 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 TIMP1P01033 207 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 TACR2P21452 398 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 ME2P23368 584 aa11.07□□□□□ -0.64
SH3RF1-203ENST00000508685 PEX2P28328 305 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms