RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 ODF3L1Q8IXM7 274 aa2.9□□□□□ -1.95
GYPB-209ENST00000508618 BBS10Q8TAM1 723 aa2.9□□□□□ -1.95
GYPB-209ENST00000508618 TMEM190Q8WZ59 177 aa2.9□□□□□ -1.95
GYPB-209ENST00000508618 SNAPC3Q92966 411 aa2.9□□□□□ -1.95
GYPB-209ENST00000508618 CDCA5Q96FF9 252 aa2.9□□□□□ -1.95
GYPB-209ENST00000508618 LRR1Q96L50 414 aa2.9□□□□□ -1.95
GYPB-209ENST00000508618 FSD1Q9BTV5 496 aa2.9□□□□□ -1.95
GYPB-209ENST00000508618 ERVMER34-1Q9H9K5 563 aa2.9□□□□□ -1.95
GYPB-209ENST00000508618 ZNF624Q9P2J8 865 aaPredicted RBP2.9□□□□□ -1.95
GYPB-209ENST00000508618 AMDHD2Q9Y303 409 aa2.9□□□□□ -1.95
GYPB-209ENST00000508618 GOLGA6L9A6NEM1 432 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 SLC25A17O43808 307 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 KRT18P05783 430 aaKnown RBP2.89□□□□□ -1.95
GYPB-209ENST00000508618 WEE2P0C1S8 567 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 TNNT1P13805 278 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 SRD5A1P18405 259 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 TMPOP42166 694 aaKnown RBP2.89□□□□□ -1.95
GYPB-209ENST00000508618 CSRP3P50461 194 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 PICALMQ13492 652 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 SMAD1Q15797 465 aaKnown RBP2.89□□□□□ -1.95
GYPB-209ENST00000508618 LRRC24Q50LG9 513 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 ESCO2Q56NI9 601 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 TCTE1Q5JU00 501 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 IL31Q6EBC2 164 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 WDR73Q6P4I2 378 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 C1orf87Q8N0U7 546 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 GHDCQ8N2G8 530 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 SCAMP5Q8TAC9 235 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 PARD3BQ8TEW8 1205 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 ERGIC1Q969X5 290 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 C3orf49Q96BT1 292 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 KTI12Q96EK9 354 aaPredicted RBP2.89□□□□□ -1.95
GYPB-209ENST00000508618 MYD88Q99836 296 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 HERC2P3Q9BVR0 1158 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 NPLQ9BXD5 320 aaPredicted RBP2.89□□□□□ -1.95
GYPB-209ENST00000508618 WDR13Q9H1Z4 485 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 C2orf42Q9NWW7 574 aa2.89□□□□□ -1.95
GYPB-209ENST00000508618 RALYQ9UKM9 306 aaKnown RBP2.89□□□□□ -1.95
GYPB-209ENST00000508618 CBY3A6NI87 242 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 LGALS16A8MUM7 142 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 DVL1O14640 695 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 CSF1P09603 554 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 NBPF7P0C2Y1 421 aaPredicted RBP2.88□□□□□ -1.95
GYPB-209ENST00000508618 ABCB4P21439 1286 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 SP100P23497 879 aaPredicted RBP2.88□□□□□ -1.95
GYPB-209ENST00000508618 TECP42680 631 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 CLCNKAP51800 687 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 NEK3P51956 506 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 DVL1P1P54792 670 aaPredicted RBP2.88□□□□□ -1.95
GYPB-209ENST00000508618 BTKQ06187 659 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 LIN54Q6MZP7 749 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 KLHL17Q6TDP4 642 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 ZNF852Q6ZMS4 543 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 WDR63Q8IWG1 891 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 SVIPQ8NHG7 77 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 HCAR2Q8TDS4 363 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 SCRN2Q96FV2 425 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 CCDC136Q96JN2 1154 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 OPRPNQ99935 248 aaPredicted RBP2.88□□□□□ -1.95
GYPB-209ENST00000508618 ZNF700Q9H0M5 742 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 G6PC2Q9NQR9 355 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 CD207Q9UJ71 328 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 KCND3Q9UK17 655 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 PCDHGB5Q9Y5G0 923 aa2.88□□□□□ -1.95
GYPB-209ENST00000508618 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 NR5A2O00482 541 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 FFAR2O15552 330 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 DHX16O60231 1041 aaKnown RBP2.87□□□□□ -1.95
GYPB-209ENST00000508618 RGS11O94810 467 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 ZNF8P17098 575 aaPredicted RBP2.87□□□□□ -1.95
GYPB-209ENST00000508618 S1PR1P21453 382 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 DCTP40126 519 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 CLK1P49759 484 aaKnown RBP2.87□□□□□ -1.95
GYPB-209ENST00000508618 MMP14P50281 582 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 BLKP51451 505 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 RAD23BP54727 409 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 TBL3Q12788 808 aaKnown RBP2.87□□□□□ -1.95
GYPB-209ENST00000508618 PDCLQ13371 301 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 SFMBT2Q5VUG0 894 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 SYNE3Q6ZMZ3 975 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 SRLQ86TD4 932 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 P2RY8Q86VZ1 359 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 TRIM58Q8NG06 486 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 WDR20Q8TBZ3 569 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 SLC20A1Q8WUM9 679 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 CDK19Q9BWU1 502 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 PLEKHA2Q9HB19 425 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 OBP2BQ9NPH6 170 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 CCDC177Q9NQR7 707 aaPredicted RBP2.87□□□□□ -1.95
GYPB-209ENST00000508618 PAK5Q9P286 719 aa2.87□□□□□ -1.95
GYPB-209ENST00000508618 COL5A2P05997 1499 aaPredicted RBP2.86□□□□□ -1.95
GYPB-209ENST00000508618 A0A0J9YWU9 116 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 ARHGEF9O43307 516 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 ITGA2P17301 1181 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 PPM1AP35813 382 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 TERF1P54274 439 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 GOLGA8FQ08AF8 430 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 CTF1Q16619 201 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 KRT24Q2M2I5 525 aa2.86□□□□□ -1.95
GYPB-209ENST00000508618 SOWAHAQ2M3V2 549 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms