RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 CFAP57Q96MR6 1250 aa5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC22A12Q96S37 553 aa5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 TTC1Q99614 292 aa5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 TRMT61BQ9BVS5 477 aaKnown RBP5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 PACSIN1Q9BY11 444 aa5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 SMOC1Q9H4F8 434 aa5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 PRDM16Q9HAZ2 1276 aa5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC2A4RGQ9NR83 387 aa5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 DUS2Q9NX74 493 aaKnown RBP5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 CFAP97Q9P2B7 532 aa5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 ANAPC7Q9UJX3 599 aa5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 SRPK3Q9UPE1 567 aa5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 ZKSCAN5Q9Y2L8 839 aa5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 NUMBLQ9Y6R0 609 aa5.65□□□□□ -1.5
HMGB1P44-201ENST00000508597 DOCK4Q8N1I0 1966 aa5.65□□□□□ -1.51
HMGB1P44-201ENST00000508597 MYOFQ9NZM1 2061 aa5.65□□□□□ -1.51
HMGB1P44-201ENST00000508597 ACOT7O00154 380 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 MDM4O15151 490 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 GPR39O43194 453 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 PRPSAP2O60256 369 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 MAFKO60675 156 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 PRAMEF12O95522 483 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 CORO1AP31146 461 aaKnown RBP5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 ADRA1BP35368 520 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 EIF2DP41214 584 aaKnown RBP5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 VIPR2P41587 438 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 KCNQ1P51787 676 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 NAP1L1P55209 391 aaKnown RBP5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 HDAC4P56524 1084 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 OCRLQ01968 901 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 GAD2Q05329 585 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 NME3Q13232 169 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 STAT4Q14765 748 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 C5orf22Q49AR2 442 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 MPPE1Q53F39 396 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 RABGAP1LQ5R372 815 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 ERMARDQ5T6L9 678 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 LCE4AQ5TA78 99 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 LRRC38Q5VT99 294 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 TRNP1Q6NT89 227 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 TEPPQ6URK8 271 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 PARM1Q6UWI2 310 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 VITQ6UXI7 678 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 LRRC31Q6UY01 552 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 POLNQ7Z5Q5 900 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 SLFN11Q7Z7L1 901 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 PHLDB2Q86SQ0 1253 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 SPATS2Q86XZ4 545 aaKnown RBP5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 MAP7D3Q8IWC1 876 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 SUGP1Q8IWZ8 645 aaKnown RBP5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 CPA6Q8N4T0 437 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 LINC00482Q8N8I6 264 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 ACRBPQ8NEB7 543 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 ATL2Q8NHH9 583 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 CCDC26Q8TAB7 109 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 KIAA1524Q8TCG1 905 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 PHOSPHO1Q8TCT1 267 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 TEKT4Q8WW24 435 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 FGF14Q92915 247 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 BOCQ9BWV1 1114 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 KRTAP4-9Q9BYQ8 210 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 SLC2A11Q9BYW1 496 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 TKTL2Q9H0I9 626 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 C8orf33Q9H7E9 229 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 BRD9Q9H8M2 597 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 GKN1Q9NS71 199 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 KCND1Q9NSA2 647 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 PIGVQ9NUD9 493 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 SMPD4Q9NXE4 827 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 WNT16Q9UBV4 365 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 CDH22Q9UJ99 828 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 AGO1Q9UL18 857 aaKnown RBP5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 USP18Q9UMW8 372 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 DUSP12Q9UNI6 340 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 SORCS3Q9UPU3 1222 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 CCL26Q9Y258 94 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 PPP2R2CQ9Y2T4 447 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 REXO2Q9Y3B8 237 aaKnown RBP5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 PMF1-BGLAPU3KQ54 211 aa5.64□□□□□ -1.51
HMGB1P44-201ENST00000508597 MYO18AQ92614 2054 aaKnown RBP5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 CXorf51AA0A1B0GTR3 108 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 MIF4GDA9UHW6 222 aaKnown RBP5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 ZNF487B1APH4 448 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 F5H5T6 163 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 MAN2B1O00754 1011 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 NEMP1O14524 444 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 HOXC11O43248 304 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 MSI1O43347 362 aaKnown RBP5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 PSTPIP1O43586 416 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 LRCH4O75427 683 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 KLKB1P03952 638 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 HMBSP08397 361 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 IRF1P10914 325 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 BMP7P18075 431 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 MIPP30301 263 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 GDI1P31150 447 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 HCAR3P49019 387 aa5.63□□□□□ -1.51
HMGB1P44-201ENST00000508597 ITGA1P56199 1179 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms