RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 NLRP14Q86W24 1093 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 FAM131BQ86XD5 332 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 IRF2BP1Q8IU81 584 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 SRRM1Q8IYB3 904 aaKnown RBP9.46□□□□□ -0.9
NEDD9-211ENST00000508546 IL22RA1Q8N6P7 574 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 NELFBQ8WX92 580 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 CASKIN2Q8WXE0 1202 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 JPH3Q8WXH2 748 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-211ENST00000508546 C18orf8Q96DM3 657 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 CRACR2AQ9BSW2 395 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 OR12D3Q9UGF7 316 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 HOOK1Q9UJC3 728 aaKnown RBP9.46□□□□□ -0.9
NEDD9-211ENST00000508546 OR1A2Q9Y585 309 aa9.46□□□□□ -0.9
NEDD9-211ENST00000508546 TSPAN11A1L157 253 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 PPP1R3GB7ZBB8 358 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 KDELR3O43731 214 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 RAMP2O60895 175 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 TMCC1O94876 653 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 IGSF6O95976 241 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 HOXC4P09017 264 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-211ENST00000508546 LIFP15018 202 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 SLC9A1P19634 815 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 XPAP23025 273 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-211ENST00000508546 CLCN1P35523 988 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 CD97P48960 835 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 KIAA1024LP59773 190 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 TRA2AQ13595 282 aaKnown RBP eCLIP9.45□□□□□ -0.9
NEDD9-211ENST00000508546 GRM3Q14832 879 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 INO80DQ53TQ3 878 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-211ENST00000508546 FAM102AQ5T9C2 384 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-211ENST00000508546 KCTD16Q68DU8 428 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 SPECC1LQ69YQ0 1117 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 TRNP1Q6NT89 227 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 C17orf82Q86X59 251 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-211ENST00000508546 XYLT1Q86Y38 959 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 SFTPA2Q8IWL1 248 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 TMEM35BQ8NCS4 154 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 OR56A4Q8NGH8 313 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 C9orf43Q8TAL5 461 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-211ENST00000508546 KIAA1524Q8TCG1 905 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 SSC4DQ8WTU2 575 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 OR1E3Q8WZA6 343 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 HMCESQ96FZ2 354 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 SLC45A3Q96JT2 553 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 TIGD1Q96MW7 591 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 DDA1Q9BW61 102 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 DPEP2Q9H4A9 486 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 RDH14Q9HBH5 336 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 FGF22Q9HCT0 170 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 CHMP5Q9NZZ3 219 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 DNAI1Q9UI46 699 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 TMEM59LQ9UK28 342 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 MAN1B1Q9UKM7 699 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 NEU3Q9UQ49 428 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 HIVEP3Q5T1R4 2406 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 PDZD2O15018 2839 aa9.45□□□□□ -0.9
NEDD9-211ENST00000508546 IGHV5-10-1A0A0J9YXX1 117 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 GTPBP10A4D1E9 387 aaKnown RBP9.44□□□□□ -0.9
NEDD9-211ENST00000508546 CFAP69A5D8W1 941 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 TMEM202A6NGA9 273 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 B4DGG1 531 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 CACNB4O00305 520 aaPredicted RBP9.44□□□□□ -0.9
NEDD9-211ENST00000508546 ZW10O43264 779 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 MTSS1O43312 755 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 FGFR1OPO95684 399 aaKnown RBP9.44□□□□□ -0.9
NEDD9-211ENST00000508546 BMP6P22004 513 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 KELP23276 732 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 ADRA1BP35368 520 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 TRIM23P36406 574 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 MMP12P39900 470 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 GPR3P46089 330 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 LIMK2P53671 638 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 BPIFB4P59827 614 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 SQSTM1Q13501 440 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 UGP2Q16851 508 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 EXOC3L4Q17RC7 722 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 TSR1Q2NL82 804 aaKnown RBP9.44□□□□□ -0.9
NEDD9-211ENST00000508546 ISM2Q6H9L7 571 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 RWDD4Q6NW29 188 aaKnown RBP9.44□□□□□ -0.9
NEDD9-211ENST00000508546 GBP6Q6ZN66 633 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 SLC47A2Q86VL8 602 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 ELOA2Q8IYF1 753 aaPredicted RBP9.44□□□□□ -0.9
NEDD9-211ENST00000508546 CACNA2D3Q8IZS8 1091 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 RCBTB1Q8NDN9 531 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 CCDC112Q8NEF3 446 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 PMEPA1Q969W9 287 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 FUBP1Q96AE4 644 aaKnown RBP9.44□□□□□ -0.9
NEDD9-211ENST00000508546 CFAP57Q96MR6 1250 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 NUDT22Q9BRQ3 303 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 ASPSCR1Q9BZE9 553 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 TMEM168Q9H0V1 697 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 PCDH12Q9NPG4 1184 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 PLCB1Q9NQ66 1216 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 CTNND2Q9UQB3 1225 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 B3GALT1Q9Y5Z6 326 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 HIVEP1P15822 2718 aa9.44□□□□□ -0.9
NEDD9-211ENST00000508546 FAM72CH0Y354 149 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 FOXN3O00409 490 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-211ENST00000508546 BUB1O43683 1085 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms