RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 AREL1O15033 823 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 PRLP01236 227 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 ELFN1P0C7U0 828 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 TPSB2P20231 275 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 ACSL1P33121 698 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 PTGIRP43119 386 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 CCR5P51681 352 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 METAP1P53582 386 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 CDH17Q12864 832 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 SGCGQ13326 291 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 TPSAB1Q15661 275 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 QPCTQ16769 361 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 FAXCQ5TGI0 409 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 KCTD11Q693B1 232 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 DPPA4Q7L190 304 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 TRIM69Q86WT6 500 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 MMGT1Q8N4V1 131 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 GLIS1Q8NBF1 620 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 VOPP1Q96AW1 172 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 NSMCE3Q96MG7 304 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 MCCC1Q96RQ3 725 aaPredicted RBP20.16■□□□□ 0.82
USP53-203ENST00000507597 LYSMD1Q96S90 227 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 FRMD8Q9BZ67 464 aaPredicted RBP20.16■□□□□ 0.82
USP53-203ENST00000507597 SEMA4AQ9H3S1 761 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 ARNT2Q9HBZ2 717 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 RAD18Q9NS91 495 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 NEU2Q9Y3R4 380 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 MUC3AQ02505 3323 aa20.16■□□□□ 0.82
USP53-203ENST00000507597 CAPN8A6NHC0 703 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 EFCAB8A8MWE9 144 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 PLK4O00444 970 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 TTI1O43156 1089 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 RNGTTO60942 597 aaKnown RBP20.15■□□□□ 0.82
USP53-203ENST00000507597 TM7SF2O76062 418 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 SUN1O94901 812 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 ADRA1AP35348 466 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 ABL2P42684 1182 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 CALCOCO2Q13137 446 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 SIM2Q14190 667 aaPredicted RBP20.15■□□□□ 0.82
USP53-203ENST00000507597 GALNT3Q14435 633 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 WDR45BQ5MNZ6 344 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 KIAA0895LQ68EN5 471 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 HORMAD1Q86X24 394 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 PPIL6Q8IXY8 311 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 TAB3Q8N5C8 712 aaPredicted RBP20.15■□□□□ 0.82
USP53-203ENST00000507597 SLC25A41Q8N5S1 370 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 DUSP15Q9H1R2 295 aaPredicted RBP20.15■□□□□ 0.82
USP53-203ENST00000507597 INVSQ9Y283 1065 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 KMT2EQ8IZD2 1858 aa20.15■□□□□ 0.82
USP53-203ENST00000507597 CACNA1IQ9P0X4 2223 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 LZTS3O60299 673 aaPredicted RBP20.14■□□□□ 0.81
USP53-203ENST00000507597 LILRB5O75023 590 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 CRTAMO95727 393 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 AGTP01019 485 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 CTPS1P17812 591 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 HNF1BP35680 557 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 MMP12P39900 470 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 TAS2R38P59533 333 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 SETMARQ53H47 684 aaPredicted RBP20.14■□□□□ 0.81
USP53-203ENST00000507597 SIRPB2Q5JXA9 342 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 PRUNE1Q86TP1 453 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 HOOK3Q86VS8 718 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 ZSWIM9Q86XI8 627 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 ASB12Q8WXK4 309 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 SNF8Q96H20 258 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 ZC3H10Q96K80 434 aaKnown RBP20.14■□□□□ 0.81
USP53-203ENST00000507597 ERP44Q9BS26 406 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 CARD6Q9BX69 1037 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 GPR63Q9BZJ6 419 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 L2HGDHQ9H9P8 463 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 B4GALT6Q9UBX8 382 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 DMTF1Q9Y222 760 aa20.14■□□□□ 0.81
USP53-203ENST00000507597 RGSL1A5PLK6 1076 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 PRR23AA6NEV1 266 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 C2orf81A6NN90 581 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 METTL12A8MUP2 240 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 MEI4A8MW99 385 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 DNALI1O14645 258 aaPredicted RBP20.13■□□□□ 0.81
USP53-203ENST00000507597 HRO43593 1189 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 FSBPO95073 299 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 ITIH2P19823 946 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 MAGEA6P43360 314 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 IHHQ14623 411 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 ARMC3Q5W041 872 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 ZDHHC20Q5W0Z9 365 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 MCUQ8NE86 351 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 FAM174AQ8TBP5 190 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 BRSK1Q8TDC3 778 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 ATOH1Q92858 354 aaPredicted RBP20.13■□□□□ 0.81
USP53-203ENST00000507597 GORASP1Q9BQQ3 440 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 CDH19Q9H159 772 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 ZFYVE1Q9HBF4 777 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 XAB2Q9HCS7 855 aaKnown RBP20.13■□□□□ 0.81
USP53-203ENST00000507597 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.13■□□□□ 0.81
USP53-203ENST00000507597 PKD2L2Q9NZM6 624 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 BFARQ9NZS9 450 aa20.13■□□□□ 0.81
USP53-203ENST00000507597 C1orf232A0A0U1RR37 186 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 A0A1W2PQU0 124 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 RAD51CO43502 376 aa20.12■□□□□ 0.81
USP53-203ENST00000507597 PPFIA2O75334 1257 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms