RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 EIF4E1BA6NMX2 242 aaKnown RBP14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 PSMD11O00231 422 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 YY2O15391 372 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 CYP2A6P11509 494 aaPredicted RBP14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 SKILP12757 684 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 CLDN6P56747 220 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 SRP54P61011 504 aaKnown RBP14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 PEX6Q13608 980 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 INPP5AQ14642 412 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 TPRG1LQ5T0D9 272 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 HGSNATQ68CP4 663 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 ENPP7Q6UWV6 458 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 HID1Q8IV36 788 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 RBFAQ8N0V3 343 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 ATPAF2Q8N5M1 289 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 NPWQ8N729 165 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 LSM14AQ8ND56 463 aaKnown RBP14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 NUDCD1Q96RS6 583 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 UBL7Q96S82 380 aaPredicted RBP14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 CBX8Q9HC52 389 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 RALYQ9UKM9 306 aaKnown RBP14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 PADI4Q9UM07 663 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 PCDHGA8Q9Y5G5 932 aa14.5□□□□□ -0.09
HMGCS1-203ENST00000507004 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.5□□□□□ -0.097e-27■□□□□ 8.4
HMGCS1-203ENST00000507004 TRAFD1O14545 582 aaPredicted RBP14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 HTRA2O43464 458 aaPredicted RBP14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 TLX3O43711 291 aaPredicted RBP14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 USP12O75317 370 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 GCATO75600 419 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 RECQL5O94762 991 aaPredicted RBP14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 RARAP10276 462 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 ITIH2P19823 946 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 CES1P23141 567 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 RBMS1P29558 406 aaKnown RBP14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 PBX1P40424 430 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 RGRP47804 291 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 GABREP78334 506 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 EIF3IQ13347 325 aaKnown RBP14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 KRT81Q14533 505 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 ALG11Q2TAA5 492 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 MARC1Q5VT66 337 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 BROXQ5VW32 411 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 GUSBP11Q6P575 273 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 LIPIQ6XZB0 460 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 MAP7D3Q8IWC1 876 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 SLC35F3Q8IY50 421 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 NETO2Q8NC67 525 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 OR56A4Q8NGH8 313 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 CSPG4P5Q96PW8 444 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 RBM15Q96T37 977 aaKnown RBP eCLIP14.49□□□□□ -0.092e-7■■■■□ 25.6
HMGCS1-203ENST00000507004 MGME1Q9BQP7 344 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 TRIM7Q9C029 511 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 AMACRQ9UHK6 382 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 ANAPC7Q9UJX3 599 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 DNPEPQ9ULA0 475 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 PHTF1Q9UMS5 762 aa14.49□□□□□ -0.09
HMGCS1-203ENST00000507004 DMXL2Q8TDJ6 3036 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 SYCE3A1L190 88 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 TK2O00142 265 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 MUSKO15146 869 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 ZW10O43264 779 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 PCCBP05166 539 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 CYP1A2P05177 515 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 CR2P20023 1033 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 IL1R2P27930 398 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 TEAD1P28347 426 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 TRIM23P36406 574 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 SLC10A7Q0GE19 358 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 RALGDSQ12967 914 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 C1orf61Q13536 156 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 SPIDRQ14159 915 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 TIGD7Q6NT04 549 aaPredicted RBP14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 ALKBH5Q6P6C2 394 aaKnown RBP14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 ZSWIM9Q86XI8 627 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 RAVER1Q8IY67 606 aaKnown RBP14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 WDR36Q8NI36 951 aaKnown RBP14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 HSPH1Q92598 858 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 LGMNQ99538 433 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 ANP32EQ9BTT0 268 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 NUP85Q9BW27 656 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 DPH1Q9BZG8 443 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 CLPBQ9H078 707 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 THAP2Q9H0W7 228 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 TCEAL2Q9H3H9 227 aaPredicted RBP14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 WDR26Q9H7D7 661 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 PCDH18Q9HCL0 1135 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 UVRAGQ9P2Y5 699 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 COQ6Q9Y2Z9 468 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 PCDHB1Q9Y5F3 818 aa14.48□□□□□ -0.09
HMGCS1-203ENST00000507004 ASXL3Q9C0F0 2248 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 ZFHX4Q86UP3 3567 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 TEX51A0A1B0GUA7 166 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 MAFKO60675 156 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 CPP00450 1065 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 PYGLP06737 847 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 PNLIPP16233 465 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 TGM2P21980 687 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 CA4P22748 312 aa14.47□□□□□ -0.09
HMGCS1-203ENST00000507004 AMPD1P23109 780 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms