RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 RTKNQ9BST9 563 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 HAUS2Q9NVX0 235 aa18.34■□□□□ 0.53
PDLIM7-216ENST00000506537 A0A1W2PQ67 120 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 TCRBV7S2A1N4TA0A589 114 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 POM121BA6NF01 834 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 HACD1B0YJ81 288 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 OPHN1O60890 802 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 TM7SF2O76062 418 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 CER1O95813 267 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 SDHBP21912 280 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 CD68P34810 354 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 CETN2P41208 172 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 SGCGQ13326 291 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 XRCC4Q13426 336 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 PUM1Q14671 1186 aaKnown RBP eCLIP18.33■□□□□ 0.521e-6■□□□□ 8.1
PDLIM7-216ENST00000506537 GSE1Q14687 1217 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 ZNF423Q2M1K9 1284 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 CCDC181Q5TID7 509 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 SLC22A18ASQ8N1D0 253 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 TP53I13Q8NBR0 393 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 DENND6BQ8NEG7 585 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 OR13H1Q8NG92 308 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 ANP32BQ92688 251 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 TADA1Q96BN2 335 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 CENPTQ96BT3 561 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 IMP4Q96G21 291 aaKnown RBP18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 TEKT5Q96M29 485 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 MCCC1Q96RQ3 725 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 RBM15Q96T37 977 aaKnown RBP eCLIP18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 GLOD4Q9HC38 313 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 GPR27Q9NS67 375 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 PHTF1Q9UMS5 762 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 CHKBQ9Y259 395 aa18.33■□□□□ 0.52
PDLIM7-216ENST00000506537 DCDC2BA2VCK2 349 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 NPIPB15A6NHN6 443 aaPredicted RBP18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 A8MX80 341 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 TJP3O95049 919 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 PTMAP06454 111 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 ALPIP09923 528 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 THEGLP0DJG4 465 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 CD59P13987 128 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 CTPS1P17812 591 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 LHCGRP22888 699 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 RBL1P28749 1068 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 IGFALSP35858 605 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 CNGA3Q16281 694 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 PRAMEF14Q5SWL7 426 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 LIPIQ6XZB0 460 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 KYAT3Q6YP21 454 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 ZNF567Q8N184 647 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 HTR3CQ8WXA8 447 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 ALS2CR12Q96Q35 445 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 SLC25A51Q9H1U9 297 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 MBNL1Q9NR56 388 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 R3HDM2Q9Y2K5 976 aaKnown RBP18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 PPIL1Q9Y3C6 166 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 HS3ST3A1Q9Y663 406 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 CACNA1AO00555 2505 aa18.32■□□□□ 0.52
PDLIM7-216ENST00000506537 A0A0U1RQS6 177 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 CFAP69A5D8W1 941 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 A6NNZ2 444 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 H7C0C1 242 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 MTSS1O43312 755 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 ELFN1P0C7U0 828 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 VIPR1P32241 457 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 ATP5OP48047 213 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 EIF3EP60228 445 aaKnown RBP18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 OVGP1Q12889 678 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 AGERQ15109 404 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 IRF4Q15306 451 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 SHBQ15464 509 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 WSCD2Q2TBF2 565 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 TPRG1LQ5T0D9 272 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 PTAR1Q7Z6K3 402 aaPredicted RBP18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 TSPAN33Q86UF1 283 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 REXO1L1PQ8IX06 675 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 TRIM58Q8NG06 486 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 SPATA22Q8NHS9 363 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 SKA1Q96BD8 255 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 SCRN2Q96FV2 425 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 KLHDC7BQ96G42 594 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 TRIB3Q96RU7 358 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 TLR10Q9BXR5 811 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 CAAP1Q9H8G2 361 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 PCDH9Q9HC56 1237 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 GDF3Q9NR23 364 aa18.31■□□□□ 0.52
PDLIM7-216ENST00000506537 A0A0J9YYE9 177 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 A0A1B0GTQ1 180 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 FPGTO14772 594 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 HEXIM1O94992 359 aaKnown RBP18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 MT-CYBP00156 380 aaPredicted RBP18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 TRBC1P01850 177 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 ZNF883P0CG24 379 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 RBP3P10745 1247 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 NFKB1P19838 968 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 HNF1BP35680 557 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 PFN3P60673 137 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 IL9RQ01113 521 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 RPS6KA1Q15418 735 aa18.3■□□□□ 0.52
PDLIM7-216ENST00000506537 Q6ZSR6 202 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms