RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 MARCKSL1P49006 195 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 CSNK1EP49674 416 aaKnown RBP7.32□□□□□ -1.24
GYPB-206ENST00000506516 LIMK1P53667 647 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 C21orf59P57076 290 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 MAXP61244 160 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 PPP2CBP62714 309 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 PPP2CAP67775 309 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 FAM193AP78312 1265 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 IFI35P80217 286 aaPredicted RBP7.32□□□□□ -1.24
GYPB-206ENST00000506516 OVGP1Q12889 678 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 XRCC4Q13426 336 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 RSPO4Q2I0M5 234 aaPredicted RBP7.32□□□□□ -1.24
GYPB-206ENST00000506516 ZNF284Q2VY69 593 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 TMEM52BQ4KMG9 183 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 ARMC12Q5T9G4 340 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 STPG1Q5TH74 334 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 TCEAL6Q6IPX3 200 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 NAPEPLDQ6IQ20 393 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 NPNTQ6UXI9 565 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 BBS12Q6ZW61 710 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 ZC3H18Q86VM9 953 aaKnown RBP7.32□□□□□ -1.24
GYPB-206ENST00000506516 PGBD5Q8N414 524 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 MFSD2AQ8NA29 543 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 C1orf216Q8TAB5 229 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 ASB12Q8WXK4 309 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 TCEAL3Q969E4 200 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 ECHDC3Q96DC8 303 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 OLFM3Q96PB7 478 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 LENG8Q96PV6 779 aaPredicted RBP7.32□□□□□ -1.24
GYPB-206ENST00000506516 IL12RB2Q99665 862 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 SEMA3CQ99985 751 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 RTKNQ9BST9 563 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 C1QTNF7Q9BXJ2 289 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 EBF2Q9HAK2 575 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 CAPN10Q9HC96 672 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 ZNF358Q9NW07 568 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 PHTF1Q9UMS5 762 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 ATP8A1Q9Y2Q0 1164 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 PCDHGC4Q9Y5F7 938 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 RAI2Q9Y5P3 530 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 HS3ST3A1Q9Y663 406 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 CACNA1HO95180 2353 aa7.32□□□□□ -1.24
GYPB-206ENST00000506516 A0A1B0GVT2 93 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 TSPAN11A1L157 253 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 FAM187AA6NFU0 413 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 IGLON5A6NGN9 336 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 C4orf47A7E2U8 309 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 UPK3BL1B0FP48 263 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 C10orf142B7Z368 130 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 UPK3BL2E5RIL1 263 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 H7C0C1 242 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 KCNK1O00180 336 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 TRAFD1O14545 582 aaPredicted RBP7.31□□□□□ -1.24
GYPB-206ENST00000506516 CDX4O14627 284 aaPredicted RBP7.31□□□□□ -1.24
GYPB-206ENST00000506516 FPGTO14772 594 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 AREL1O15033 823 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 HTRA2O43464 458 aaPredicted RBP7.31□□□□□ -1.24
GYPB-206ENST00000506516 MMP20O60882 483 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 OPHN1O60890 802 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 CER1O95813 267 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 CPP00450 1065 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 CYP2A6P11509 494 aaPredicted RBP7.31□□□□□ -1.24
GYPB-206ENST00000506516 ITIH2P19823 946 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 PTPN7P35236 360 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 ID4P47928 161 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 ATP5OP48047 213 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 EPHB1P54762 984 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 GRIK2Q13002 908 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 PUM1Q14671 1186 aaKnown RBP eCLIP7.31□□□□□ -1.24
GYPB-206ENST00000506516 SUZ12Q15022 739 aaKnown RBP7.31□□□□□ -1.24
GYPB-206ENST00000506516 RPS6KA1Q15418 735 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 HLA-BQ31612 363 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 UAP1L1Q3KQV9 507 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 TEX44Q53QW1 395 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 MEI1Q5TIA1 1274 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 SEL1L3Q68CR1 1132 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 IQCHQ86VS3 1027 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 DCP2Q8IU60 420 aaKnown RBP7.31□□□□□ -1.24
GYPB-206ENST00000506516 MINDY1Q8N5J2 469 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.31□□□□□ -1.24
GYPB-206ENST00000506516 TRIM58Q8NG06 486 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 KLK6Q92876 244 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 VOPP1Q96AW1 172 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 HAUS1Q96CS2 278 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 KLHDC7BQ96G42 594 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 HES6Q96HZ4 224 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 SLC6A18Q96N87 628 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 AGAP3Q96P47 875 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 VAT1Q99536 393 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 ORAI3Q9BRQ5 295 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 GAREM1Q9H706 876 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 ETNK1Q9HBU6 452 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 PCDH12Q9NPG4 1184 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 FSCN3Q9NQT6 498 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 GDF3Q9NR23 364 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 RAB6BQ9NRW1 208 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 RXFP3Q9NSD7 469 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 SEPT10Q9P0V9 454 aa7.31□□□□□ -1.24
GYPB-206ENST00000506516 SAE1Q9UBE0 346 aaPredicted RBP7.31□□□□□ -1.24
GYPB-206ENST00000506516 PACSIN2Q9UNF0 486 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms