RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 LINGO4Q6UY18 593 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 TPGS1Q6ZTW0 290 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 SPATA21Q7Z572 469 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 CCDC91Q7Z6B0 441 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 GRASPQ7Z6J2 395 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 CLEC14AQ86T13 490 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 CELF5Q8N6W0 485 aaKnown RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 ARMC2Q8NEN0 867 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 BLOC1S5Q8TDH9 187 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 SMG7Q92540 1137 aaKnown RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 IRF7Q92985 503 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 HDAC10Q969S8 669 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 E2F7Q96AV8 911 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 ISG20Q96AZ6 181 aaKnown RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 RMDN1Q96DB5 314 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 NSMCE3Q96MG7 304 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 TSNARE1Q96NA8 513 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 CDCA3Q99618 268 aaPredicted RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 C19orf43Q9BQ61 176 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 SLC2A11Q9BYW1 496 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 C12orf65Q9H3J6 166 aaKnown RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 TLE6Q9H808 572 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 PIDD1Q9HB75 910 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 SPHK2Q9NRA0 654 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 MARK1Q9P0L2 795 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 MID2Q9UJV3 735 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 RPL26L1Q9UNX3 145 aaKnown RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 ARL2BPQ9Y2Y0 163 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 FCF1Q9Y324 198 aaKnown RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 MRPS23Q9Y3D9 190 aaKnown RBP8.09□□□□□ -1.11
COL4A5-208ENST00000505728 HCFC2Q9Y5Z7 792 aa8.09□□□□□ -1.11
COL4A5-208ENST00000505728 ZNF318Q5VUA4 2279 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 A0A087X1B8 175 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 FAM95CA0A1B0GW59 222 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 CCT8L1PA6NM43 557 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 ANKRD66B4E2M5 251 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 GOLGA8TH3BQL2 631 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 PER2O15055 1255 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 FZD6O60353 706 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 GJB3O75712 270 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 KIAA0754O94854 1291 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 GLP2RO95838 553 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 IGSF6O95976 241 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 GSRP00390 522 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 PROCP04070 461 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 TROVE2P10155 538 aaKnown RBP eCLIP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 IL9P15248 144 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 OGNP20774 298 aaKnown RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 LPOP22079 712 aaPredicted RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 KCNA5P22460 613 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 CD70P32970 193 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 SLC1A2P43004 574 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 ZNF140P52738 457 aaPredicted RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 PRKAA2P54646 552 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 SNRPD1P62314 119 aaKnown RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 NTHL1P78549 312 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 MPP1Q00013 466 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 TRAF2Q12933 501 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 IFT88Q13099 833 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 GALNT3Q14435 633 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 USP10Q14694 798 aaKnown RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 ZKSCAN8Q15776 578 aaPredicted RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 LEXMQ3ZCV2 418 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 TAF1BQ53T94 588 aaPredicted RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 ARMC12Q5T9G4 340 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 ZNF470Q6ECI4 717 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 MRNIPQ6NTE8 343 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 CCDC121Q6ZUS5 278 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 FAM47EQ6ZV65 393 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 OTOAQ7RTW8 1153 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 PTAR1Q7Z6K3 402 aaPredicted RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 KIAA0907Q7Z7F0 614 aaPredicted RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 SDCCAG8Q86SQ7 713 aaPredicted RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 TMEM25Q86YD3 366 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 CILP2Q8IUL8 1156 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 ARID3BQ8IVW6 561 aaPredicted RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 DENND6AQ8IWF6 608 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 PLPP6Q8IY26 295 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 ADGRG2Q8IZP9 1017 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 TTC16Q8NEE8 873 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 LPCAT1Q8NF37 534 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 OR6P1Q8NGX9 317 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 ZNF398Q8TD17 642 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 FAM122AQ96E09 287 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 TSPAN17Q96FV3 270 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 CDKN2AIPNLQ96HQ2 116 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 TBATAQ96M53 351 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 TCF12Q99081 682 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 TSSK1BQ9BXA7 367 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 CEP44Q9C0F1 390 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 SMG9Q9H0W8 520 aaKnown RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 KDM4CQ9H3R0 1056 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 DZANK1Q9NVP4 752 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 NLE1Q9NVX2 485 aaPredicted RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 PLK2Q9NYY3 685 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 TMEM216Q9P0N5 145 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 SIRPGQ9P1W8 387 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.08□□□□□ -1.12
COL4A5-208ENST00000505728 KLHL14Q9P2G3 628 aa8.08□□□□□ -1.12
COL4A5-208ENST00000505728 GGT7Q9UJ14 662 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms