RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.04■□□□□ 0.32
LIN54-204ENST00000505397 LZTR1Q8N653 840 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 CCNYL1Q8N7R7 359 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 TMEM102Q8N9M5 508 aaPredicted RBP17.04■□□□□ 0.32
LIN54-204ENST00000505397 PRICKLE1Q96MT3 831 aaPredicted RBP17.04■□□□□ 0.32
LIN54-204ENST00000505397 SLC39A8Q9C0K1 460 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 COPS7BQ9H9Q2 264 aaPredicted RBP17.04■□□□□ 0.32
LIN54-204ENST00000505397 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.04■□□□□ 0.32
LIN54-204ENST00000505397 TNFRSF10BO14763 440 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 TCTN1Q2MV58 587 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 AFMIDQ63HM1 303 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 LRRC43Q8N309 656 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 HMGCLL1Q8TB92 370 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 SPPL2BQ8TCT7 592 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 ELMO2Q96JJ3 720 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 MRGPRX2Q96LB1 330 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 NPAS2Q99743 824 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 PKP2Q99959 881 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 TMEM175Q9BSA9 504 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 GPR62Q9BZJ7 368 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 POMKQ9H5K3 350 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 SUDS3Q9H7L9 328 aaPredicted RBP17.04■□□□□ 0.32
LIN54-204ENST00000505397 VCX3AQ9NNX9 186 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 CNOT11Q9UKZ1 510 aaKnown RBP17.04■□□□□ 0.32
LIN54-204ENST00000505397 SARDHQ9UL12 918 aa17.04■□□□□ 0.32
LIN54-204ENST00000505397 FGF10O15520 208 aaPredicted RBP17.03■□□□□ 0.32
LIN54-204ENST00000505397 CXCL10P02778 98 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 KPNA2P52292 529 aaKnown RBP17.03■□□□□ 0.32
LIN54-204ENST00000505397 ARPP19P56211 112 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 SULT2A1Q06520 285 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 USP41Q3LFD5 358 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 TRIM60Q495X7 471 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 TECRLQ5HYJ1 363 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 ARMC3Q5W041 872 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 MARCH5Q9NX47 278 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 PLK2Q9NYY3 685 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 FBXO5Q9UKT4 447 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 PCDHGA7Q9Y5G6 932 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 AP4B1Q9Y6B7 739 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 TRIM38O00635 465 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 IRAK2O43187 625 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 HLA-DQB2P05538 268 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 TFAP2AP05549 437 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 PAMP19021 973 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 PFKPQ01813 784 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 TLE2Q04725 743 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 BRMS1LQ5PSV4 323 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 KIAA0408Q6ZU52 694 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 AHI1Q8N157 1196 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 NUP93Q8N1F7 819 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 RNF148Q8N7C7 305 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 ASB9Q96DX5 294 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 B3GALT6Q96L58 329 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 FBXO44Q9H4M3 255 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 ZNF696Q9H7X3 374 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 MEAF6Q9HAF1 191 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 MRGBPQ9NV56 204 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 HCSTQ9UBK5 93 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 PCDHGB4Q9UN71 923 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 PCDHGB5Q9Y5G0 923 aa17.03■□□□□ 0.32
LIN54-204ENST00000505397 NT5C1B-RDH14C9J2C7 533 aa17.02■□□□□ 0.32
LIN54-204ENST00000505397 FGFR3P22607 806 aa17.02■□□□□ 0.32
LIN54-204ENST00000505397 SLC14A2Q15849 920 aa17.02■□□□□ 0.32
LIN54-204ENST00000505397 DDR2Q16832 855 aa17.02■□□□□ 0.32
LIN54-204ENST00000505397 ZNF470Q6ECI4 717 aa17.02■□□□□ 0.32
LIN54-204ENST00000505397 FAR2Q96K12 515 aa17.02■□□□□ 0.32
LIN54-204ENST00000505397 C8orf48Q96LL4 319 aa17.02■□□□□ 0.32
LIN54-204ENST00000505397 PRKD2Q9BZL6 878 aa17.02■□□□□ 0.32
LIN54-204ENST00000505397 SIK2Q9H0K1 926 aa17.02■□□□□ 0.32
LIN54-204ENST00000505397 MAGEA11P43364 429 aa17.02■□□□□ 0.31
LIN54-204ENST00000505397 RPL5P46777 297 aaKnown RBP17.02■□□□□ 0.31
LIN54-204ENST00000505397 PTK2BQ14289 1009 aa17.02■□□□□ 0.31
LIN54-204ENST00000505397 PSMD5Q16401 504 aa17.02■□□□□ 0.31
LIN54-204ENST00000505397 TOX2Q96NM4 488 aa17.02■□□□□ 0.31
LIN54-204ENST00000505397 UNKQ9C0B0 810 aaKnown RBP17.02■□□□□ 0.31
LIN54-204ENST00000505397 NDFIP2Q9NV92 336 aa17.02■□□□□ 0.31
LIN54-204ENST00000505397 SUCOQ9UBS9 1254 aaKnown RBP17.02■□□□□ 0.31
LIN54-204ENST00000505397 NEMP2A6NFY4 417 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 AURKAO14965 403 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 PAGE1O75459 146 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 GALTP07902 379 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 HNRNPLP14866 589 aaKnown RBP eCLIP17.01■□□□□ 0.31
LIN54-204ENST00000505397 PBX3P40426 434 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 HSPA13P48723 471 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 GALNT1Q10472 559 aaPredicted RBP17.01■□□□□ 0.31
LIN54-204ENST00000505397 LRP8Q14114 963 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 MRPL58Q14197 206 aaKnown RBP17.01■□□□□ 0.31
LIN54-204ENST00000505397 SDHAF4Q5VUM1 108 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 GK5Q6ZS86 529 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 TOP1MTQ969P6 601 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 DGCR14Q96DF8 476 aaKnown RBP17.01■□□□□ 0.31
LIN54-204ENST00000505397 CCDC126Q96EE4 140 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 TMA16Q96EY4 203 aaKnown RBP17.01■□□□□ 0.31
LIN54-204ENST00000505397 MRPL1Q9BYD6 325 aaKnown RBP17.01■□□□□ 0.31
LIN54-204ENST00000505397 SLC2A11Q9BYW1 496 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 SMOC2Q9H3U7 446 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 CATSPERBQ9H7T0 1116 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 ARNT2Q9HBZ2 717 aa17.01■□□□□ 0.31
LIN54-204ENST00000505397 NYNRINQ9P2P1 1898 aaKnown RBP17.01■□□□□ 0.31
LIN54-204ENST00000505397 KCNU1A8MYU2 1149 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms