RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 PERM1Q5SV97 790 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 FAM182AQ5T1J6 154 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 HIST2H2BCQ6DN03 193 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 CRTC1Q6UUV9 634 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 DENND6BQ8NEG7 585 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 LMX1AQ8TE12 382 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 SUV39H2Q9H5I1 410 aa13.24□□□□□ -0.29
DDX41-204ENST00000504807 A0A0U1RQS6 177 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 TRAFD1O14545 582 aaPredicted RBP13.23□□□□□ -0.29
DDX41-204ENST00000504807 RIOK3O14730 519 aaKnown RBP13.23□□□□□ -0.29
DDX41-204ENST00000504807 AQP9O43315 295 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 OPA1O60313 960 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 TM7SF2O76062 418 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 SERPINC1P01008 464 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 GYPCP04921 128 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 CD48P09326 243 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 CCDC172P0C7W6 258 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 RARAP10276 462 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 TGM2P21980 687 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 IL4RP24394 825 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 HTR7P34969 479 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 EIF4A3P38919 411 aaKnown RBP13.23□□□□□ -0.29
DDX41-204ENST00000504807 CCR10P46092 362 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 LIG3P49916 1009 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 DAB2P98082 770 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 CDKN3Q16667 212 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 ALG11Q2TAA5 492 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 FILIP1LQ4L180 1135 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 SRLQ86TD4 932 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 DCP2Q8IU60 420 aaKnown RBP13.23□□□□□ -0.29
DDX41-204ENST00000504807 SLC35F3Q8IY50 421 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 PHACTR4Q8IZ21 702 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 CACTIN-AS1Q8N1I8 211 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 CXorf40AQ8TE69 158 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 CPLX3Q8WVH0 158 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 HSPH1Q92598 858 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 ECHDC3Q96DC8 303 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 SMIM14Q96QK8 99 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 ZWILCHQ9H900 591 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 STARD5Q9NSY2 213 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 OR1A2Q9Y585 309 aa13.23□□□□□ -0.29
DDX41-204ENST00000504807 BSNQ9UPA5 3926 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 ANKRD36A6QL64 1941 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 A8MX80 341 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 PRPSAP2O60256 369 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 PALMO75781 387 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 PDX1P52945 283 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 ADKP55263 362 aaKnown RBP13.22□□□□□ -0.29
DDX41-204ENST00000504807 ERVPABLB-1P60509 514 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 HNRNPKP61978 463 aaKnown RBP eCLIP13.22□□□□□ -0.29
DDX41-204ENST00000504807 TLE1Q04724 770 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 MMRN1Q13201 1228 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 INPP5AQ14642 412 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 DPYSL2Q16555 572 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 ATP13A4Q4VNC1 1196 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 PRRT3Q5FWE3 981 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 MACC1Q6ZN28 852 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 CCDC81Q6ZN84 652 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 POLNQ7Z5Q5 900 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 LSMEM2Q8N112 164 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 IFI44Q8TCB0 444 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 LRRN4Q8WUT4 740 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 PTCD2Q8WV60 388 aaKnown RBP13.22□□□□□ -0.29
DDX41-204ENST00000504807 TSACCQ96A04 125 aaPredicted RBP13.22□□□□□ -0.29
DDX41-204ENST00000504807 CSPG4P5Q96PW8 444 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 NCAPGQ9BPX3 1015 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 PCDH18Q9HCL0 1135 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.22□□□□□ -0.29
DDX41-204ENST00000504807 WDR70Q9NW82 654 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 APOBEC3BQ9UH17 382 aaKnown RBP13.22□□□□□ -0.29
DDX41-204ENST00000504807 IPO11Q9UI26 975 aaKnown RBP13.22□□□□□ -0.29
DDX41-204ENST00000504807 RABGEF1Q9UJ41 708 aa13.22□□□□□ -0.29
DDX41-204ENST00000504807 A0A1W2PQJ5 194 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 ARHGAP42A6NI28 874 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 YY2O15391 372 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 MAFKO60675 156 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 USP12O75317 370 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 RNF8O76064 485 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 PCCBP05166 539 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 TSHRP16473 764 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 PCK1P35558 622 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 CSNK1DP48730 415 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 HCAR3P49019 387 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 ARSEP51690 589 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 MAXP61244 160 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 IL10RBQ08334 325 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 LINC00303Q3SY05 128 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 TDRD12Q587J7 1177 aaKnown RBP13.21□□□□□ -0.29
DDX41-204ENST00000504807 FAM174AQ8TBP5 190 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 PDXPQ96GD0 296 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 ZNF641Q96N77 438 aaPredicted RBP13.21□□□□□ -0.29
DDX41-204ENST00000504807 BOCQ9BWV1 1114 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 LGR4Q9BXB1 951 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 PACSIN1Q9BY11 444 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 THSD1Q9NS62 852 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 CAPN11Q9UMQ6 739 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 MAN2B2Q9Y2E5 1009 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 ATP8A1Q9Y2Q0 1164 aa13.21□□□□□ -0.29
DDX41-204ENST00000504807 CSNK1G3Q9Y6M4 447 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms