RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 LEKR1Q6ZMV7 388 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 SEPT14Q6ZU15 432 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 C9orf139Q6ZV77 190 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 ZNF771Q7L3S4 317 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 WDR5BQ86VZ2 330 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 TMC8Q8IU68 726 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 ANKRD18AQ8IVF6 992 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 PEX5LQ8IYB4 626 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 RNF168Q8IYW5 571 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 RBFAQ8N0V3 343 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 VPS52Q8N1B4 723 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 NEXN-AS1Q8NBZ9 246 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 APPL2Q8NEU8 664 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 RASSF8Q8NHQ8 419 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC26Q8TAB7 109 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 ERMNQ8TAM6 284 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 NEK9Q8TD19 979 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 SECTM1Q8WVN6 248 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 TCP11Q8WWU5 503 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CTNNBL1Q8WYA6 563 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 RSC1A1Q92681 617 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 TAF4BQ92750 862 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 KCNJ9Q92806 393 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 FRAT1Q92837 279 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CD101Q93033 1021 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 MUL1Q969V5 352 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 JAKMIP2Q96AA8 810 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 LRRC45Q96CN5 670 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 MTBPQ96DY7 904 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 CFAP36Q96G28 342 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 FEM1CQ96JP0 617 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 C8orf76Q96K31 380 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 RIPOR3Q96MK2 946 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 NEK1Q96PY6 1258 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 SH3GL1Q99961 368 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 HDHD5Q9BXW7 423 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 LRRCC1Q9C099 1032 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 PRKRIP1Q9H875 184 aaPredicted RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 EVA1AQ9H8M9 152 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 AIPL1Q9NZN9 384 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 SLC39A10Q9ULF5 831 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 ITM2BQ9Y287 266 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 TMEM98Q9Y2Y6 226 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 NOSIPQ9Y314 301 aaKnown RBP2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 EVC2Q86UK5 1308 aa2.12□□□□□ -2.07
HMGB3P17-201ENST00000504195 BRD4O60885 1362 aaPredicted RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCDC144AA2RUR9 1427 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CLRN2A0PK11 232 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 DYTNA2CJ06 578 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM172BPA6NC97 362 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 DDTLA6NHG4 134 aaPredicted RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 HNRNPCL2B2RXH8 293 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 C19orf81C9J6K1 198 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 RASA4BC9J798 803 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 PRAC2D3DTV9 90 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM72CH0Y354 149 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 M0QX08 132 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 PDLIM1O00151 329 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 GRM8O00222 908 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CASQ2O14958 399 aaPredicted RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 RASA4O43374 803 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 FIBPO43427 364 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 ASNA1O43681 348 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 EXTL3O43909 919 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 HNRNPCL1O60812 293 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 STAM2O75886 525 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CH25HO95992 272 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 RHOXF2BP0C7M4 288 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 SFTPCP11686 197 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 TRIM21P19474 475 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 YWHAQP27348 245 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CSTF2P33240 577 aaKnown RBP eCLIP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CDKN1AP38936 164 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 SKIV2L2P42285 1042 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 DPP6P42658 865 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 GPR12P47775 334 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 PSMD7P51665 324 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CSE1LP55060 971 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 RIPK4P57078 832 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 KRT83P78385 493 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CDK18Q07002 472 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 BECN1Q14457 450 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 RBBP5Q15291 538 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 INAQ16352 499 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CALCRLQ16602 461 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 LONRF1Q17RB8 773 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 BTBD16Q32M84 506 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 KBTBD12Q3ZCT8 623 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 TRIM60Q495X7 471 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 BOLA3Q53S33 107 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 XKR9Q5GH70 373 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 ATPAF1Q5TC12 328 aaPredicted RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM72AQ5TYM5 149 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 FAM72DQ6L9T8 149 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 AADACL2Q6P093 401 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 MTFR2Q6P444 385 aa2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 KIAA1324Q6UXG2 1013 aaKnown RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 CCBE1Q6UXH8 406 aaPredicted RBP2.11□□□□□ -2.07
HMGB3P17-201ENST00000504195 UNQ6126/PRO20091Q6UXV3 157 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms