RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 CASP6P55212 293 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 KIF5AQ12840 1032 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 COASYQ13057 564 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 MMEL1Q495T6 779 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 C9orf57Q5W0N0 161 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 CPLX2Q6PUV4 134 aaKnown RBP4.18□□□□□ -1.74
SUB1-204ENST00000504016 SHFQ7M4L6 423 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 ARMC9Q7Z3E5 817 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 R3HCC1LQ7Z5L2 792 aaKnown RBP4.18□□□□□ -1.74
SUB1-204ENST00000504016 PAF1Q8N7H5 531 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 C11orf65Q8NCR3 313 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 TMEM163Q8TC26 289 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 KLHL29Q96CT2 875 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 RTP4Q96DX8 246 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 SLC26A6Q9BXS9 759 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 PREBQ9HCU5 417 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 KCND2Q9NZV8 630 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 GJD2Q9UKL4 321 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 SARDHQ9UL12 918 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 PAM16Q9Y3D7 125 aa4.18□□□□□ -1.74
SUB1-204ENST00000504016 CCDC196A0A1B0GTZ2 297 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.17□□□□□ -1.74
SUB1-204ENST00000504016 NPIPB11E5RHQ5 1161 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 KCNJ13O60928 360 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 MTA2O94776 668 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 SOX30O94993 753 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 F9P00740 461 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 PLGP00747 810 aaPredicted RBP4.17□□□□□ -1.74
SUB1-204ENST00000504016 HEXAP06865 529 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 G6PDP11413 515 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 ETFAP13804 333 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 SSTR2P30874 369 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 HILS1P60008 231 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 SEC61A1P61619 476 aaKnown RBP4.17□□□□□ -1.74
SUB1-204ENST00000504016 SORDQ00796 357 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 BNC1Q01954 994 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 GRSF1Q12849 480 aaKnown RBP eCLIP4.17□□□□□ -1.74
SUB1-204ENST00000504016 COL28A1Q2UY09 1125 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 DCAF6Q58WW2 860 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 FAM76BQ5HYJ3 339 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 JAKMIP3Q5VZ66 844 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 LCTLQ6UWM7 567 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 B3GNT6Q6ZMB0 384 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.17□□□□□ -1.741e-8■■■■□ 24.5
SUB1-204ENST00000504016 HAPLN4Q86UW8 402 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 EVI5LQ96CN4 794 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 CSF3RQ99062 836 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 SLC25A33Q9BSK2 321 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 C1QTNF4Q9BXJ3 329 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 CHMP4AQ9BY43 222 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 TKTL2Q9H0I9 626 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 RETREG1Q9H6L5 497 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 MAGEE1Q9HCI5 957 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 BPIFA1Q9NP55 256 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 DDX4Q9NQI0 724 aaKnown RBP4.17□□□□□ -1.74
SUB1-204ENST00000504016 SMYD2Q9NRG4 433 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.17□□□□□ -1.74
SUB1-204ENST00000504016 SNX9Q9Y5X1 595 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 SCN5AQ14524 2016 aa4.17□□□□□ -1.74
SUB1-204ENST00000504016 A0A0U1RQF3 1178 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 A0A1B0GVC2 190 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 PLSCR5A0PG75 271 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 ZIC3O60481 467 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 SOCS5O75159 536 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 CH25HO95992 272 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 ZNF12P17014 697 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 PAX3P23760 479 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 POU3F1Q03052 451 aaPredicted RBP4.16□□□□□ -1.74
SUB1-204ENST00000504016 EEF1A2Q05639 463 aaKnown RBP4.16□□□□□ -1.74
SUB1-204ENST00000504016 PTP4A2Q12974 167 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 RNPS1Q15287 305 aaKnown RBP4.16□□□□□ -1.74
SUB1-204ENST00000504016 PAPPA-AS1Q5QFB9 102 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 ATF7IPQ6VMQ6 1270 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 SLC46A3Q7Z3Q1 461 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 ZC3HC1Q86WB0 502 aaKnown RBP4.16□□□□□ -1.74
SUB1-204ENST00000504016 SFTPA2Q8IWL1 248 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 SLC35F3Q8IY50 421 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 CLIP4Q8N3C7 705 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 PGBD5Q8N414 524 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 AADATQ8N5Z0 425 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 CADM4Q8NFZ8 388 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 RND1Q92730 232 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 IRAK4Q9NWZ3 460 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 PPP1R14DQ9NXH3 145 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 SLC9A2Q9UBY0 812 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 KCNG2Q9UJ96 466 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 RCOR1Q9UKL0 485 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 MKLN1Q9UL63 735 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 A4GNTQ9UNA3 340 aa4.16□□□□□ -1.74
SUB1-204ENST00000504016 IGLV5-52A0A0A0MRZ9 124 aa4.15□□□□□ -1.75
SUB1-204ENST00000504016 HSPA12AO43301 675 aa4.15□□□□□ -1.75
SUB1-204ENST00000504016 SEC14L5O43304 696 aa4.15□□□□□ -1.75
SUB1-204ENST00000504016 TNFSF14O43557 240 aa4.15□□□□□ -1.75
SUB1-204ENST00000504016 TFP02787 698 aa4.15□□□□□ -1.75
SUB1-204ENST00000504016 UBL4AP11441 157 aa4.15□□□□□ -1.75
SUB1-204ENST00000504016 IL7RP16871 459 aa4.15□□□□□ -1.75
SUB1-204ENST00000504016 ABCD1P33897 745 aa4.15□□□□□ -1.75
SUB1-204ENST00000504016 SHMT1P34896 483 aa4.15□□□□□ -1.75
SUB1-204ENST00000504016 EIF2S3P41091 472 aaKnown RBP4.15□□□□□ -1.75
SUB1-204ENST00000504016 ADORA2A-AS1P86434 159 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms