RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 HDHD2Q9H0R4 259 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 VPS45Q9NRW7 570 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 SLC27A5Q9Y2P5 690 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 SNED1Q8TER0 1413 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 UQCRBP14927 111 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 CTNNB1P35222 781 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 USP4Q13107 963 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 DGCR6Q14129 220 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 ADAMTSL2Q86TH1 951 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 PQLC1Q8N2U9 271 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 SLAIN1Q8ND83 568 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 LRRN4Q8WUT4 740 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 OLFM1Q99784 485 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 RBPJLQ9UBG7 517 aa16.23■□□□□ 0.19
HMGXB3-202ENST00000503427 MTA2O94776 668 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 HNRNPLP14866 589 aaKnown RBP eCLIP16.22■□□□□ 0.194e-6■□□□□ 11
HMGXB3-202ENST00000503427 ADRA1BP35368 520 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 KCNA10Q16322 511 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 HDDC2Q7Z4H3 204 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 CSGALNACT1Q8TDX6 532 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 ATL1Q8WXF7 558 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 QRFPRQ96P65 431 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 DEPDC7Q96QD5 511 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 POLR1BQ9H9Y6 1135 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 PSMD13Q9UNM6 376 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 AK5Q9Y6K8 562 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 DUOX1Q9NRD9 1551 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 SLC28A1O00337 649 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 KCTD21Q4G0X4 260 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 NKX2-3Q8TAU0 364 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 IRGQQ8WZA9 623 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 MTFMTQ96DP5 389 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 CAPNS2Q96L46 248 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 FCRL2Q96LA5 508 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 BBS4Q96RK4 519 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 ATP13A3Q9H7F0 1226 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 VWA7Q9Y334 891 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 LTBP3Q9NS15 1303 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 PIPSLA2A3N6 862 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 BCLAF3A2AJT9 711 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 EFCAB10A6NFE3 127 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 OTCP00480 354 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 CNPP09543 421 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 COL6A2P12110 1019 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 SMAD3P84022 425 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 ITGADQ13349 1161 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 FBXL19Q6PCT2 694 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 FITM2Q8N6M3 262 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 BPIFB6Q8NFQ5 453 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 ENKURQ8TC29 256 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 NUAK2Q9H093 628 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 RSL24D1Q9UHA3 163 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 TBC1D30Q9Y2I9 924 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 M0R2N6 131 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 LRCH4O75427 683 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 TM7SF2O76062 418 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 PRKCQQ04759 706 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 PLCL1Q15111 1095 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 KCTD19Q17RG1 926 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 SPESP1Q6UW49 350 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 RBM44Q6ZP01 1051 aaKnown RBP16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 MAGEB10Q96LZ2 347 aaPredicted RBP16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 CORO1BQ9BR76 489 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 GOLGA2P5Q9HBQ8 144 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 MCM8Q9UJA3 840 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 ZNF180Q9UJW8 692 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 NCKAP1Q9Y2A7 1128 aa16.22■□□□□ 0.19
HMGXB3-202ENST00000503427 BBIP1A8MTZ0 92 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 KPNA5O15131 536 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 C2P06681 752 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 TSPAN19P0C672 248 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 KLF10Q13118 480 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 RGS21Q2M5E4 152 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 SETMARQ53H47 684 aaPredicted RBP16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 SLC26A9Q7LBE3 791 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 TDRPQ86YL5 185 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 SLC4A11Q8NBS3 891 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 ADCY4Q8NFM4 1077 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 NFKBIZQ9BYH8 718 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 CLK4Q9HAZ1 481 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 PLGRKTQ9HBL7 147 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 ZNF510Q9Y2H8 683 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 FGF1P05230 155 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 LAG3P18627 525 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 CDC42P60953 191 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 COX10Q12887 443 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 ZIK1Q3SY52 487 aaPredicted RBP16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 CDYL2Q8N8U2 506 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 CSPG4P5Q96PW8 444 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 CCDC28BQ9BUN5 200 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 SEZ6LQ9BYH1 1024 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 NOL6Q9H6R4 1146 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 ZDHHC6Q9H6R6 413 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 S100A14Q9HCY8 104 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 BTRCQ9Y297 605 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 MRPS23Q9Y3D9 190 aaKnown RBP16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 PMM2O15305 246 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 MAGEC1O60732 1142 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 TBL1XO60907 577 aa16.21■□□□□ 0.19
HMGXB3-202ENST00000503427 CES5AQ6NT32 575 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms