RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 MYH6P13533 1939 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 RGPD1P0DJD0 1748 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 SERPINF2P08697 491 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 THPOP40225 353 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 KCNJ11Q14654 390 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 MAPKAPK3Q16644 382 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 SH3D19Q5HYK7 790 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 ARHGAP17Q68EM7 881 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 TKTL2Q9H0I9 626 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 RERGLQ9H628 205 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 RPRD1BQ9NQG5 326 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 SNTG2Q9NY99 539 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 TMED5Q9Y3A6 229 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 F8W810 466 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 TALDO1P37837 337 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 ITGA1P56199 1179 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 C11orf91Q3C1V1 193 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 INTS11Q5TA45 600 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 GPSM1Q86YR5 675 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 CPSF7Q8N684 471 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 CMASQ8NFW8 434 aaPredicted RBP17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 NTPCRQ9BSD7 190 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 TSEN34Q9BSV6 310 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 CDT1Q9H211 546 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 EIF2B3Q9NR50 452 aaKnown RBP17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 ZNF221Q9UK13 617 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 AQP12BA6NM10 295 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 IVDP26440 423 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 CYP2C18P33260 490 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 ARPC4P59998 168 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 SPATA19Q7Z5L4 167 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 AQP12AQ8IXF9 295 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 FNDC8Q8TC99 324 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 BTRCQ9Y297 605 aa17.28■□□□□ 0.36
HMGXB3-201ENST00000502717 PDHXO00330 501 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 B4GALT4O60513 344 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 GRM3Q14832 879 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 GLYATQ6IB77 296 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 NIPAL1Q6NVV3 410 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 ZNF549Q6P9A3 640 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 CDH24Q86UP0 819 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 NKAPQ8N5F7 415 aaKnown RBP17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 UTP4Q969X6 686 aaKnown RBP17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 NXNL1Q96CM4 212 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 FOPNLQ96NB1 174 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 CLEC4MQ9H2X3 399 aaPredicted RBP17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 TMEM9Q9P0T7 183 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 A0A088AWK7 358 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 CCDC182A6NF36 153 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 GPR182O15218 404 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 BCAS2O75934 225 aaPredicted RBP17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 SOAT1P35610 550 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 OR1G1P47890 313 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 SIX1Q15475 284 aaPredicted RBP17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 EML3Q32P44 896 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 TIFABQ6ZNK6 161 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 MUC3BQ9H195 1237 aa17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 SUCOQ9UBS9 1254 aaKnown RBP17.27■□□□□ 0.36
HMGXB3-201ENST00000502717 LRG1P02750 347 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 CKMT2P17540 419 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 TUBP50607 506 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 MPP1Q00013 466 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 ECT2LQ008S8 904 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 SEMA5AQ13591 1074 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 KLHL17Q6TDP4 642 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 C12orf43Q96C57 262 aaKnown RBP17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 NODALQ96S42 347 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 RBM4BQ9BQ04 359 aaKnown RBP17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 RBM4Q9BWF3 364 aaKnown RBP17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 GPR88Q9GZN0 384 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 TMEM39AQ9NV64 488 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 FKTNO75072 461 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 PRKCHP24723 683 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 PPP3CCP48454 512 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 REPS2Q8NFH8 660 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 LMO3Q8TAP4 145 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 TFAP2BQ92481 460 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 SPASTQ9UBP0 616 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 RPS6KA6Q9UK32 745 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 CNOT6Q9ULM6 557 aaKnown RBP17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 VWA7Q9Y334 891 aa17.27■□□□□ 0.35
HMGXB3-201ENST00000502717 TK2O00142 265 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 DENRO43583 198 aaKnown RBP17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 AP2A1O95782 977 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 HOXC6P09630 235 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 LINC00032P0C843 101 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 SLURP2P0DP57 97 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 TPTEP56180 551 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 ADAM17P78536 824 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 BNIP3Q12983 259 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 PLEKHM3Q6ZWE6 761 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 REM2Q8IYK8 340 aaPredicted RBP17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 PHTF2Q8N3S3 785 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 PCDHAC1Q9H158 963 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 ADAMTS6Q9UKP5 1117 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 PDE10AQ9Y233 779 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 UGT2B11O75310 529 aa17.26■□□□□ 0.35
HMGXB3-201ENST00000502717 CCNE2O96020 404 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms