RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 CD72P21854 359 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 SKIV2L2P42285 1042 aaKnown RBP4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 MAGEA4P43358 317 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 ATP5OP48047 213 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 ARCN1P48444 511 aaKnown RBP4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 MXI1P50539 228 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 TOB1P50616 345 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CCR3P51677 355 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 EPHB4P54760 987 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CLRN1P58418 232 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 YPEL5P62699 121 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 TRA2BP62995 288 aaKnown RBP4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CCNA1P78396 465 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 DMTNQ08495 405 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 GRAPQ13588 217 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 RIN1Q13671 783 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZNF273Q14593 569 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 SSPNQ14714 243 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 R3HDM1Q15032 1099 aaKnown RBP4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 IQCB1Q15051 598 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 INAQ16352 499 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 MGAT5BQ3V5L5 792 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 C10orf76Q5T2E6 689 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 SLC25A24Q6NUK1 477 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 EFCAB12Q6NXP0 572 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 MTHFD1LQ6UB35 978 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CLEC9AQ6UXN8 241 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 PARS2Q7L3T8 475 aaKnown RBP4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 OTUD6AQ7L8S5 288 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 SPATA19Q7Z5L4 167 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 PPP1R32Q7Z5V6 425 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 ADCK2Q7Z695 626 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 ADCK1Q86TW2 530 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 FBXW8Q8N3Y1 598 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 MINDY1Q8N5J2 469 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 C11orf44Q8N8P7 122 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 MRPL43Q8N983 215 aaKnown RBP4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 XXYLT1Q8NBI6 393 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CAMKVQ8NCB2 501 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 OR52K2Q8NGK3 314 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 SUN3Q8TAQ9 357 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 SLC35B2Q8TB61 432 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 SLC2A12Q8TD20 617 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CLEC4CQ8WTT0 213 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 TFAP2CQ92754 450 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 PGAM5Q96HS1 289 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CFAP57Q96MR6 1250 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CTAGE1Q96RT6 745 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 PLEKHF1Q96S99 279 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 TXN2Q99757 166 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 PIMREGQ9BSJ6 248 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 UTP14AQ9BVJ6 771 aaKnown RBP4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CACNG6Q9BXT2 260 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZNF341Q9BYN7 854 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 ACPTQ9BZG2 426 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 KCNH6Q9H252 994 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 IKZF4Q9H2S9 585 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 SYNPO2LQ9H987 977 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 USP29Q9HBJ7 922 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 GBA2Q9HCG7 927 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 SLC35D1Q9NTN3 355 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 THAP1Q9NVV9 213 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CYP39A1Q9NYL5 469 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 HSPB7Q9UBY9 170 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 AMACRQ9UHK6 382 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 FAM153AQ9UHL3 310 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 SLC12A4Q9UP95 1085 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CHKBQ9Y259 395 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CLDN16Q9Y5I7 305 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 NFS1Q9Y697 457 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 CEP350Q5VT06 3117 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 PNPLA7Q6ZV29 1317 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 MAPK8IP3Q9UPT6 1336 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 ITGB4P16144 1822 aa4.42□□□□□ -1.7
HMGB1P21-201ENST00000502313 C5P01031 1676 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 KCPQ6ZWJ8 1503 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 HEG1Q9ULI3 1381 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TBC1D3DA0A087WVF3 549 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TBC1D3IA0A087WXS9 549 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TBC1D3EA0A087X179 549 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TBC1D3KA0A087X1G2 549 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TBC1D3BA6NDS4 549 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TBC1D3FA6NER0 549 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 CCDC169A6NNP5 214 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 CXorf49A8MYA2 514 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 GPR89AB7ZAQ6 455 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TBC1D3LB9A6J9 549 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 ADM5C9JUS6 153 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 SGK1O00141 431 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 CD3EAPO15446 510 aaKnown RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 PAPSS1O43252 624 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 CTIFO43310 598 aaKnown RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 B4GALT4O60513 344 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 PAGE4O60829 102 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 TACC1O75410 805 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 BBOX1O75936 387 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 IPO13O94829 963 aaKnown RBP4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 PRSS23O95084 383 aa4.41□□□□□ -1.7
HMGB1P21-201ENST00000502313 CHEK2O96017 543 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms