RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 ASH1LQ9NR48 2969 aaKnown RBP12.11□□□□□ -0.47
CNOT4-211ENST00000498534 TSPAN11A1L157 253 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 B8ZZF3 427 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 J3KR12 359 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 CACNB4O00305 520 aaPredicted RBP12.11□□□□□ -0.47
CNOT4-211ENST00000498534 BUB1BO60566 1050 aaPredicted RBP12.11□□□□□ -0.47
CNOT4-211ENST00000498534 PRAMEF11O60813 436 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 PALMO75781 387 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 PCCBP05166 539 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 RPLP0P05388 317 aaKnown RBP12.11□□□□□ -0.47
CNOT4-211ENST00000498534 JMJD7P0C870 316 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 CDK11BP21127 795 aaKnown RBP12.11□□□□□ -0.47
CNOT4-211ENST00000498534 CSNK1DP48730 415 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 COPB1P53618 953 aaKnown RBP12.11□□□□□ -0.47
CNOT4-211ENST00000498534 RPL7AP62424 266 aaKnown RBP12.11□□□□□ -0.47
CNOT4-211ENST00000498534 UBXN1Q04323 297 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 MMRN1Q13201 1228 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 CLN3Q13286 438 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 MTM1Q13496 603 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 ACAD10Q6JQN1 1059 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 MON1BQ7L1V2 547 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 TAF8Q7Z7C8 310 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 SRLQ86TD4 932 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 CAMK1DQ8IU85 385 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 KYQ8NBH2 561 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 FAM46DQ8NEK8 389 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 TTC9Q92623 222 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 MED8Q96G25 268 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.11□□□□□ -0.47
CNOT4-211ENST00000498534 LRRN3Q9H3W5 708 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 ATP8A1Q9Y2Q0 1164 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 PCDHGA7Q9Y5G6 932 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 DGKBQ9Y6T7 804 aa12.11□□□□□ -0.47
CNOT4-211ENST00000498534 UNC13CQ8NB66 2214 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 PMS2P1A4D2B8 440 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 EIF3CLB5ME19 914 aaKnown RBP12.1□□□□□ -0.47
CNOT4-211ENST00000498534 PDE2AO00408 941 aaPredicted RBP12.1□□□□□ -0.47
CNOT4-211ENST00000498534 CASC3O15234 703 aaKnown RBP12.1□□□□□ -0.47
CNOT4-211ENST00000498534 GLB1P16278 677 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 FERP16591 822 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 SLC5A2P31639 672 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 UGT1A5P35504 534 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 MMP12P39900 470 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 PAPOLAP51003 745 aaKnown RBP12.1□□□□□ -0.47
CNOT4-211ENST00000498534 BCL2L1Q07817 233 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 NSUN2Q08J23 767 aaKnown RBP eCLIP12.1□□□□□ -0.47
CNOT4-211ENST00000498534 ARHGEF7Q14155 803 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 PPP1R15BQ5SWA1 713 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 KIAA1614Q5VZ46 1190 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 PPP1R2P3Q6NXS1 205 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 Q8N9G6 341 aaPredicted RBP12.1□□□□□ -0.47
CNOT4-211ENST00000498534 TSEN2Q8NCE0 465 aaKnown RBP12.1□□□□□ -0.47
CNOT4-211ENST00000498534 OR56A4Q8NGH8 313 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 TMEM159Q96B96 161 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 RBM15Q96T37 977 aaKnown RBP eCLIP12.1□□□□□ -0.473e-10■■■■■ 33.6
CNOT4-211ENST00000498534 EIF3CQ99613 913 aaKnown RBP12.1□□□□□ -0.47
CNOT4-211ENST00000498534 FOXP3Q9BZS1 431 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 DHX35Q9H5Z1 703 aaKnown RBP12.1□□□□□ -0.47
CNOT4-211ENST00000498534 LRRC19Q9H756 370 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 PARVAQ9NVD7 372 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 RABGEF1Q9UJ41 708 aa12.1□□□□□ -0.47
CNOT4-211ENST00000498534 ATXN7L1Q9ULK2 861 aaPredicted RBP12.1□□□□□ -0.47
CNOT4-211ENST00000498534 TENM4Q6N022 2769 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 TCRBV5S1A1TA0A578 114 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 LGALS16A8MUM7 142 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 D6RAR5 112 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 EEF2KO00418 725 aaKnown RBP12.09□□□□□ -0.47
CNOT4-211ENST00000498534 TNFRSF10CO14798 259 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 NVLO15381 856 aaKnown RBP12.09□□□□□ -0.47
CNOT4-211ENST00000498534 RECQL5O94762 991 aaPredicted RBP12.09□□□□□ -0.47
CNOT4-211ENST00000498534 HOXC4P09017 264 aaPredicted RBP12.09□□□□□ -0.47
CNOT4-211ENST00000498534 ELFN1P0C7U0 828 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 PNLIPP16233 465 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 TNFAIP3P21580 790 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 CCKBRP32239 447 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 RENBPP51606 427 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 PDX1P52945 283 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 RFTN1Q14699 578 aaPredicted RBP12.09□□□□□ -0.47
CNOT4-211ENST00000498534 ERMARDQ5T6L9 678 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 OGFOD3Q6PK18 319 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 SASS6Q6UVJ0 657 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 XKR5Q6UX68 686 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 USP53Q70EK8 1073 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 B3GNT8Q7Z7M8 397 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 CCNJLQ8IV13 435 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 MCOLN2Q8IZK6 566 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 GPR156Q8NFN8 814 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 PTCD2Q8WV60 388 aaKnown RBP12.09□□□□□ -0.47
CNOT4-211ENST00000498534 CELF6Q96J87 481 aaKnown RBP12.09□□□□□ -0.47
CNOT4-211ENST00000498534 CINPQ9BW66 212 aaPredicted RBP12.09□□□□□ -0.47
CNOT4-211ENST00000498534 SLC39A8Q9C0K1 460 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 DPEP2Q9H4A9 486 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 SP110Q9HB58 689 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 PDFQ9HBH1 243 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 SEPT10Q9P0V9 454 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 LRIT1Q9P2V4 623 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 LIMA1Q9UHB6 759 aaKnown RBP12.09□□□□□ -0.47
CNOT4-211ENST00000498534 MOSPD1Q9UJG1 213 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 APPL1Q9UKG1 709 aa12.09□□□□□ -0.47
CNOT4-211ENST00000498534 AP4E1Q9UPM8 1137 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms