RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 PTPN5P54829 565 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 SLC7A5Q01650 507 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 CNTN1Q12860 1018 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 AGERQ15109 404 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 PCSK7Q16549 785 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 MAP7D1Q3KQU3 841 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 TEX35Q5T0J7 233 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 DPPA4Q7L190 304 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 NLRP9Q7RTR0 991 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 C11orf74Q86VG3 221 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 ZSWIM9Q86XI8 627 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 RELL1Q8IUW5 271 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 PDIK1LQ8N165 341 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 HDDC3Q8N4P3 179 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 MDGA1Q8NFP4 955 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 NELL1Q92832 810 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 SERPINB12Q96P63 405 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 OMDQ99983 421 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 C1QTNF1Q9BXJ1 281 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 EPHX3Q9H6B9 360 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 MRM3Q9HC36 420 aaKnown RBP19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 PREBQ9HCU5 417 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 ZDHHC18Q9NUE0 388 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 SPATA6Q9NWH7 488 aaPredicted RBP19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 FADS3Q9Y5Q0 445 aa19.83■□□□□ 0.77
SCAMP3-209ENST00000497470 TDGF1P13385 188 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 HMGCLP35914 325 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 MMP12P39900 470 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 TPMTP51580 245 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 ARL4CP56559 192 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 DNAJC21Q5F1R6 531 aaKnown RBP19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 ANKRD22Q5VYY1 191 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 ZDHHC20Q5W0Z9 365 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 ZNF534Q76KX8 674 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 CAND1Q86VP6 1230 aaKnown RBP19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 NLRP8Q86W28 1048 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 TMEM105Q8N8V8 129 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 DNAAF3Q8N9W5 541 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 LRRN4CLQ8ND94 238 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 LPCAT1Q8NF37 534 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 PDCD6IPQ8WUM4 868 aaKnown RBP19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 HMGB4Q8WW32 186 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 RAD18Q9NS91 495 aa19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 NFKBIL1Q9UBC1 381 aaPredicted RBP19.82■□□□□ 0.76
SCAMP3-209ENST00000497470 TCRBV7S3A2A0A539 114 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 SDR42E2A6NKP2 422 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 CRTAMO95727 393 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 ADRA1DP25100 572 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 VIPR1P32241 457 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 TAF1AQ15573 450 aaPredicted RBP19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 CDKN3Q16667 212 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 PCID2Q5JVF3 399 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 ZDHHC24Q6UX98 284 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 WDR5BQ86VZ2 330 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 OR52K1Q8NGK4 314 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 TRIM31Q9BZY9 425 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 BTBD1Q9H0C5 482 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 DPH5Q9H2P9 285 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 PCDH12Q9NPG4 1184 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 C2orf42Q9NWW7 574 aa19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 BCCIPQ9P287 314 aaKnown RBP eCLIP19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 MTRF1LQ9UGC7 380 aaKnown RBP19.81■□□□□ 0.76
SCAMP3-209ENST00000497470 A0A1W2PP55 124 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 HEATR9A2RTY3 570 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 AXIN1O15169 862 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 RHOXF2BP0C7M4 288 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 CNR2P34972 360 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 HNF1BP35680 557 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 HIF1AQ16665 826 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 SPDYCQ5MJ68 293 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 ANO7Q6IWH7 933 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 KIAA1161Q6NSJ0 714 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 KIAA1324Q6UXG2 1013 aaKnown RBP19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 SLC36A4Q6YBV0 504 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 CYP2U1Q7Z449 544 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 TMC3Q7Z5M5 1100 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 PAF1Q8N7H5 531 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 OR2T34Q8NGX1 318 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 FBXO25Q8TCJ0 367 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 HHIPQ96QV1 700 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 RHOXF2Q9BQY4 288 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 KIFC1Q9BW19 673 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 NEUROG2Q9H2A3 272 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 ANKZF1Q9H8Y5 726 aa19.8■□□□□ 0.76
SCAMP3-209ENST00000497470 PLXND1Q9Y4D7 1925 aa19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 MROH6A6NGR9 719 aa19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 LRRC72A6NJI9 287 aa19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 C2orf81A6NN90 581 aa19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 RNASEH2AO75792 299 aaKnown RBP19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 ABL2P42684 1182 aa19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 CHRNA4P43681 627 aa19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 PLTPP55058 493 aa19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 TAS2R38P59533 333 aa19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 SPARCL1Q14515 664 aa19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 USP39Q53GS9 565 aaKnown RBP19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 CENPUQ71F23 418 aa19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 LONP2Q86WA8 852 aa19.79■□□□□ 0.76
SCAMP3-209ENST00000497470 TRIM69Q86WT6 500 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms