RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	DKK4	Q9UBT3	224 aa		5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	ZFC3H1	O60293	1989 aa	Known RBP	5.63	□□□□□ -1.51
UBE3C-208	ENST00000497368	BOD1L1	Q8NFC6	3051 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	GOLGA6L4	A6NEF3	574 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	FAM47DP	A6NHR8	397 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368		E9PAM4	449 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368		H0Y626	953 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	TRIM38	O00635	465 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	MED7	O43513	233 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	SDC3	O75056	442 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	TRIM16	O95361	564 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	MYF5	P13349	255 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	UCHL3	P15374	230 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	PRLR	P16471	622 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	C5AR1	P21730	350 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	MAT2A	P31153	395 aa	Known RBP	5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	GK	P32189	559 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	CCR1	P32246	355 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	ACVRL1	P37023	503 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	USP8	P40818	1118 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	GRK6	P43250	576 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	RXRG	P48443	463 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	HDAC4	P56524	1084 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	GSC	P56915	257 aa	Predicted RBP	5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	OGDH	Q02218	1023 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	NME3	Q13232	169 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	SLC12A1	Q13621	1099 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	KRT31	Q15323	416 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	DLG2	Q15700	870 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	COL28A1	Q2UY09	1125 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	SOWAHC	Q53LP3	525 aa	Predicted RBP	5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	RNF219	Q5W0B1	726 aa	Predicted RBP	5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	SEL1L3	Q68CR1	1132 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	KCTD16	Q68DU8	428 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	NAPEPLD	Q6IQ20	393 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	PCSK4	Q6UW60	755 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	IL27RA	Q6UWB1	636 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	CLEC17A	Q6ZS10	378 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	PARS2	Q7L3T8	475 aa	Known RBP	5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	THAP5	Q7Z6K1	395 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	TFAP2D	Q7Z6R9	452 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	PHLDB2	Q86SQ0	1253 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	FAM131B	Q86XD5	332 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	CCDC185	Q8N715	623 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	DCAF4L2	Q8NA75	395 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	MLKL	Q8NB16	471 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	PIWIL2	Q8TC59	973 aa	Known RBP	5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	SETD7	Q8WTS6	366 aa	Known RBP	5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	CCDC34	Q96HJ3	373 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	CCDC74B	Q96LY2	380 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	RPRD1A	Q96P16	312 aa	Predicted RBP	5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	SPAG5	Q96R06	1193 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	KLF6	Q99612	283 aa	Predicted RBP	5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	MYOC	Q99972	504 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	TUBGCP2	Q9BSJ2	902 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	METTL5	Q9NRN9	209 aa	Known RBP	5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	UCKL1	Q9NWZ5	548 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	SUN2	Q9UH99	717 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	HOOK1	Q9UJC3	728 aa	Known RBP	5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	SCML1	Q9UN30	329 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	PLA2G4C	Q9UP65	541 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	ITM2B	Q9Y287	266 aa		5.62	□□□□□ -1.51
UBE3C-208	ENST00000497368	HELZ2	Q9BYK8	2649 aa	Known RBP	5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	PMS2P1	A4D2B8	440 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	SLC22A31	A6NKX4	558 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	C2CD4B	A6NLJ0	364 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	GOLGA8S	H3BPF8	625 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	CAPN9	O14815	690 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	MCF2L	O15068	1137 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	ALOX15B	O15296	676 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	SLC7A4	O43246	635 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	TNFSF14	O43557	240 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	CLDN11	O75508	207 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	C1QL1	O75973	258 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	IL1B	P01584	269 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	RHOC	P08134	193 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	UNG	P13051	313 aa	Predicted RBP	5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	ZNF18	P17022	549 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	MMP8	P22894	467 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	ERCC5	P28715	1186 aa	Predicted RBP	5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	CD38	P28907	300 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	MTIF2	P46199	727 aa	Known RBP	5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	SERPINH1	P50454	418 aa	Known RBP	5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	PDX1	P52945	283 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	CDH4	P55283	916 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	CLDN2	P57739	230 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	CDK17	Q00537	523 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	ARID5A	Q03989	594 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	CLC	Q05315	142 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	HNRNPD	Q14103	355 aa	Known RBP	5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	SLC25A52	Q3SY17	297 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	CCDC14	Q49A88	953 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	TCP11X2	Q5H9J9	407 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	EFHC1	Q5JVL4	640 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	BRMS1L	Q5PSV4	323 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	RABGAP1L	Q5R372	815 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	FAM102A	Q5T9C2	384 aa	Predicted RBP	5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	NAA35	Q5VZE5	725 aa		5.61	□□□□□ -1.51
UBE3C-208	ENST00000497368	C19orf48	Q6RUI8	117 aa		5.61	□□□□□ -1.51

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