RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 GON7Q9BXV9 100 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SLC7A5P2Q9GIP4 190 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SDCBP2Q9H190 292 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 MUC3BQ9H195 1237 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 MUC13Q9H3R2 512 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 LRRC40Q9H9A6 602 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 XPNPEP3Q9NQH7 507 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 SAE1Q9UBE0 346 aaPredicted RBP9.12□□□□□ -0.95
HPS4-217ENST00000496385 GABRQQ9UN88 632 aa9.12□□□□□ -0.95
HPS4-217ENST00000496385 TRPC5OSA6NMA1 111 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 AP3B1O00203 1094 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 GPIP06744 558 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 PGK2P07205 417 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 ACO1P21399 889 aaKnown RBP9.11□□□□□ -0.95
HPS4-217ENST00000496385 TBXAS1P24557 533 aaPredicted RBP9.11□□□□□ -0.95
HPS4-217ENST00000496385 PSMA4P25789 261 aaKnown RBP9.11□□□□□ -0.95
HPS4-217ENST00000496385 RBL1P28749 1068 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 ZNF76P36508 570 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 NKX2-5P52952 324 aaPredicted RBP9.11□□□□□ -0.95
HPS4-217ENST00000496385 GALK2Q01415 458 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 BNC1Q01954 994 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 BNIP2Q12982 314 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 PAGE2BQ5JRK9 111 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 TXNRD3NBQ6F5E7 133 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 C8orf82Q6P1X6 216 aaPredicted RBP9.11□□□□□ -0.95
HPS4-217ENST00000496385 NEK5Q6P3R8 708 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 RFX6Q8HWS3 928 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 CBWD2Q8IUF1 395 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 CACTIN-AS1Q8N1I8 211 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 ANKRD52Q8NB46 1076 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 FAM156AQ8NDB6 213 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 SHCBP1Q8NEM2 672 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 OR7A2PQ8NGA2 310 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 SLC2A14Q8TDB8 520 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 DACH2Q96NX9 599 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 NPAS2Q99743 824 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 NAT9Q9BTE0 207 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 B3GNT4Q9C0J1 378 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 IL22Q9GZX6 179 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 SPC25Q9HBM1 224 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 TM9SF3Q9HD45 589 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 ATP13A2Q9NQ11 1180 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 INTS10Q9NVR2 710 aaKnown RBP9.11□□□□□ -0.95
HPS4-217ENST00000496385 ZNF639Q9UID6 485 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 ADAMTS5Q9UNA0 930 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 DHRS12A0PJE2 317 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 PRORSD1PA6NEY8 169 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 MPOP05164 745 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 JUNP05412 331 aaKnown RBP9.11□□□□□ -0.95
HPS4-217ENST00000496385 TRAPPC2P0DI81 140 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 TRAPPC2BP0DI82 140 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 MLNP12872 115 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 TFEBP19484 476 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 ENPP1P22413 925 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 TYK2P29597 1187 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 CLCQ05315 142 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 CYP24A1Q07973 514 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 SMU1Q2TAY7 513 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 TJAP1Q5JTD0 557 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 CYP4A22Q5TCH4 519 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 PRMT9Q6P2P2 845 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 TRMT10BQ6PF06 316 aaKnown RBP9.11□□□□□ -0.95
HPS4-217ENST00000496385 UBE2Q1Q7Z7E8 422 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 ADCK1Q86TW2 530 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 ZBTB46Q86UZ6 589 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 TRPV3Q8NET8 790 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 OR6F1Q8NGZ6 308 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 ROPN1LQ96C74 230 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 FBXL20Q96IG2 436 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 CEP170P1Q96L14 293 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 RDH12Q96NR8 316 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 C2orf49Q9BVC5 232 aaPredicted RBP9.11□□□□□ -0.95
HPS4-217ENST00000496385 CHID1Q9BWS9 393 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 WDR55Q9H6Y2 383 aaPredicted RBP9.11□□□□□ -0.95
HPS4-217ENST00000496385 GPRC5CQ9NQ84 441 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 CACNA2D2Q9NY47 1150 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 WARS2Q9UGM6 360 aaKnown RBP9.11□□□□□ -0.95
HPS4-217ENST00000496385 MOSPD1Q9UJG1 213 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 BAG5Q9UL15 447 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 PCDHGB1Q9Y5G3 927 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 COPG1Q9Y678 874 aaKnown RBP9.11□□□□□ -0.95
HPS4-217ENST00000496385 A3GALT2U3KPV4 340 aa9.11□□□□□ -0.95
HPS4-217ENST00000496385 KAT6AQ92794 2004 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 IGLV3-22A0A075B6J6 115 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 BCLAF3A2AJT9 711 aaKnown RBP9.1□□□□□ -0.95
HPS4-217ENST00000496385 PIK3R2O00459 728 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 NFIBO00712 420 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 GRID2O43424 1007 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 TMCC2O75069 709 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 ALBP02768 609 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 UMPSP11172 480 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 CRHBPP24387 322 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 PRIM2P49643 509 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 ZNF135P52742 658 aaPredicted RBP9.1□□□□□ -0.95
HPS4-217ENST00000496385 CLDN10P78369 228 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 MRPS15P82914 257 aaKnown RBP9.1□□□□□ -0.95
HPS4-217ENST00000496385 OGDHQ02218 1023 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 PRKCZQ05513 592 aa9.1□□□□□ -0.95
HPS4-217ENST00000496385 TARDBPQ13148 414 aaKnown RBP eCLIP9.1□□□□□ -0.95
HPS4-217ENST00000496385 GRTP1Q5TC63 336 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms