RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 GAS2L3Q86XJ1 694 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 CCDC13Q8IYE1 715 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 CCNYQ8ND76 341 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 CALR3Q96L12 384 aaKnown RBP17.13■□□□□ 0.33
COMMD3-214ENST00000496071 SEMA3CQ99985 751 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 DUSP23Q9BVJ7 150 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 RBM22Q9NW64 420 aaKnown RBP eCLIP17.13■□□□□ 0.33
COMMD3-214ENST00000496071 UCKL1Q9NWZ5 548 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 NLGN3Q9NZ94 848 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 DTLQ9NZJ0 730 aa17.13■□□□□ 0.33
COMMD3-214ENST00000496071 EPN1Q9Y6I3 576 aaPredicted RBP17.13■□□□□ 0.33
COMMD3-214ENST00000496071 ARID1BQ8NFD5 2236 aaPredicted RBP17.12■□□□□ 0.33
COMMD3-214ENST00000496071 TMEM8BA6NDV4 472 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 C3orf70A6NLC5 250 aaPredicted RBP17.12■□□□□ 0.33
COMMD3-214ENST00000496071 APOL1O14791 398 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 SIGLEC6O43699 453 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 RFPL3O75679 317 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 RECQL5O94762 991 aaPredicted RBP17.12■□□□□ 0.33
COMMD3-214ENST00000496071 MAP3K6O95382 1288 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 JUNDP17535 347 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 FECHP22830 423 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 HTR1BP28222 390 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 BLKP51451 505 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 SEMG2Q02383 582 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 TRAF2Q12933 501 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 EIF2B5Q13144 721 aaKnown RBP17.12■□□□□ 0.33
COMMD3-214ENST00000496071 DNAJC3Q13217 504 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 MTM1Q13496 603 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 PROX2Q3B8N5 592 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 CCDC157Q569K6 752 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 MACC1Q6ZN28 852 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 PLD5Q8N7P1 536 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 ATL2Q8NHH9 583 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 GATA6Q92908 595 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 SCRN2Q96FV2 425 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 TBATAQ96M53 351 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 APOOQ9BUR5 198 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 TMEM121BQ9BXQ6 578 aaPredicted RBP17.12■□□□□ 0.33
COMMD3-214ENST00000496071 EVA1BQ9NVM1 165 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 SPASTQ9UBP0 616 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 B4GALT6Q9UBX8 382 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 PPIL1Q9Y3C6 166 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 ALG6Q9Y672 507 aa17.12■□□□□ 0.33
COMMD3-214ENST00000496071 C1QTNF9BB2RNN3 333 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 TRIM38O00635 465 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 AQP9O43315 295 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 PSTPIP1O43586 416 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 NDUFA10O95299 355 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 PGLSO95336 258 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 C1QTNF9P0C862 333 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 TNNT1P13805 278 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 CA4P22748 312 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 ACP1P24666 158 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 VIPR1P32241 457 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 ACADVLP49748 655 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 PPIDQ08752 370 aaKnown RBP17.11■□□□□ 0.33
COMMD3-214ENST00000496071 INPP5AQ14642 412 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 SMAD1Q15797 465 aaKnown RBP17.11■□□□□ 0.33
COMMD3-214ENST00000496071 TPRG1LQ5T0D9 272 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 CCNI2Q6ZMN8 369 aaPredicted RBP17.11■□□□□ 0.33
COMMD3-214ENST00000496071 BZW1Q7L1Q6 419 aaKnown RBP17.11■□□□□ 0.33
COMMD3-214ENST00000496071 TMPRSS12Q86WS5 348 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 RFX6Q8HWS3 928 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 ZNF548Q8NEK5 533 aaPredicted RBP17.11■□□□□ 0.33
COMMD3-214ENST00000496071 TPCN2Q8NHX9 752 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 RNF25Q96BH1 459 aaPredicted RBP17.11■□□□□ 0.33
COMMD3-214ENST00000496071 SLC13A1Q9BZW2 595 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 BRD8Q9H0E9 1235 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 HEY1Q9Y5J3 304 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 RAI2Q9Y5P3 530 aa17.11■□□□□ 0.33
COMMD3-214ENST00000496071 A8MX80 341 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 PSMD11O00231 422 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 TPP1O14773 563 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 PPP1R12AO14974 1030 aaPredicted RBP17.1■□□□□ 0.33
COMMD3-214ENST00000496071 FFAR2O15552 330 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 GIMD1P0DJR0 217 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 DUSP3P51452 185 aaPredicted RBP17.1■□□□□ 0.33
COMMD3-214ENST00000496071 DAB2P98082 770 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 PPARDQ03181 441 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 TFDP2Q14188 446 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 NFATC4Q14934 902 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 ACOX1Q15067 660 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 PDK1Q15118 436 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 ST3GAL2Q16842 350 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 FAXCQ5TGI0 409 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 DHRS13Q6UX07 377 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 KDM7AQ6ZMT4 941 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 USP45Q70EL2 814 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 PHACTR4Q8IZ21 702 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 FAM181AQ8N9Y4 354 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 USP29Q9HBJ7 922 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 APOBEC3BQ9UH17 382 aaKnown RBP17.1■□□□□ 0.33
COMMD3-214ENST00000496071 KLF15Q9UIH9 416 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.1■□□□□ 0.33
COMMD3-214ENST00000496071 HYOU1Q9Y4L1 999 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 TTLL3Q9Y4R7 772 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 ACACBO00763 2458 aa17.1■□□□□ 0.33
COMMD3-214ENST00000496071 PLXNB3Q9ULL4 1909 aa17.09■□□□□ 0.33
COMMD3-214ENST00000496071 SOWAHDA6NJG2 315 aa17.09■□□□□ 0.33
COMMD3-214ENST00000496071 K7ESM1 405 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms