RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 RPL6Q02878 288 aaKnown RBP11.98□□□□□ -0.49
APTX-233ENST00000496030 PTPRRQ15256 657 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 UGP2Q16851 508 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 LONRF2Q1L5Z9 754 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 LRRC73Q5JTD7 316 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 SPDYCQ5MJ68 293 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 ANKRD20A2Q5SQ80 823 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 ANKRD20A1Q5TYW2 823 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 ANKRD20A3Q5VUR7 823 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 PID1Q7Z2X4 250 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 C11orf74Q86VG3 221 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 KLHDC8BQ8IXV7 354 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 CHCHD4Q8N4Q1 142 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 OR2T34Q8NGX1 318 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 OR14C36Q8NHC7 312 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 SPATA22Q8NHS9 363 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 C1orf216Q8TAB5 229 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 PIH1D2Q8WWB5 315 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 OXNAD1Q96HP4 312 aaPredicted RBP11.98□□□□□ -0.49
APTX-233ENST00000496030 PPP1R16AQ96I34 528 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 SMIM14Q96QK8 99 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 TRIB3Q96RU7 358 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 RBM15Q96T37 977 aaKnown RBP eCLIP11.98□□□□□ -0.49
APTX-233ENST00000496030 NAPGQ99747 312 aaPredicted RBP11.98□□□□□ -0.49
APTX-233ENST00000496030 TMEM121Q9BTD3 319 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 PCED1AQ9H1Q7 454 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 KDM4CQ9H3R0 1056 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 EBF2Q9HAK2 575 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 GGT7Q9UJ14 662 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 DRG1Q9Y295 367 aaKnown RBP11.98□□□□□ -0.49
APTX-233ENST00000496030 TTLL3Q9Y4R7 772 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 RAI2Q9Y5P3 530 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 SLCO1B1Q9Y6L6 691 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 PLXNB3Q9ULL4 1909 aa11.98□□□□□ -0.49
APTX-233ENST00000496030 CTAGE9A4FU28 777 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 UPK3BL1B0FP48 263 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 UPK3BL2E5RIL1 263 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 PDE2AO00408 941 aaPredicted RBP11.97□□□□□ -0.49
APTX-233ENST00000496030 RIOK3O14730 519 aaKnown RBP11.97□□□□□ -0.49
APTX-233ENST00000496030 LATO43561 262 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 MT-CYBP00156 380 aaPredicted RBP11.97□□□□□ -0.49
APTX-233ENST00000496030 PRKCGP05129 697 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 ITGAVP06756 1048 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 SERPINF2P08697 491 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 CCR5P51681 352 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 PPP2CBP62714 309 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 PPP2CAP67775 309 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 FAM193AP78312 1265 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 SIM1P81133 766 aaPredicted RBP11.97□□□□□ -0.49
APTX-233ENST00000496030 SNX1Q13596 522 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 SLC14A2Q15849 920 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 CYP1B1Q16678 543 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 TMEM259Q4ZIN3 620 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 KIAA0895LQ68EN5 471 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 TTC27Q6P3X3 843 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 FBXL19Q6PCT2 694 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 BRAT1Q6PJG6 821 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 KDELC1Q6UW63 502 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 SYT10Q6XYQ8 523 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 LPCAT2Q7L5N7 544 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 TTC7BQ86TV6 843 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 CBARPQ8N350 705 aaPredicted RBP11.97□□□□□ -0.49
APTX-233ENST00000496030 GLIS1Q8NBF1 620 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 CCDC110Q8TBZ0 833 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 MAIP1Q8WWC4 291 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 DNASE2BQ8WZ79 361 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 RAB7BQ96AH8 199 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 BIRC7Q96CA5 298 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 SPATA13Q96N96 652 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 FCRL5Q96RD9 977 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 AP1M1Q9BXS5 423 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 TDRD1Q9BXT4 1180 aaKnown RBP11.97□□□□□ -0.49
APTX-233ENST00000496030 PCDH12Q9NPG4 1184 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 DYRK4Q9NR20 520 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 KLHL8Q9P2G9 620 aaPredicted RBP11.97□□□□□ -0.49
APTX-233ENST00000496030 ZFR2Q9UPR6 939 aaKnown RBP11.97□□□□□ -0.49
APTX-233ENST00000496030 ITM2BQ9Y287 266 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.97□□□□□ -0.49
APTX-233ENST00000496030 PPIL1Q9Y3C6 166 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 PCDHB9Q9Y5E1 797 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 LRRK1Q38SD2 2015 aa11.97□□□□□ -0.49
APTX-233ENST00000496030 TBC1D3DA0A087WVF3 549 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 TBC1D3IA0A087WXS9 549 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 TBC1D3EA0A087X179 549 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 TBC1D3KA0A087X1G2 549 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 FAM221BA6H8Z2 402 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 TBC1D3FA6NER0 549 aaPredicted RBP11.96□□□□□ -0.49
APTX-233ENST00000496030 FAM47DPA6NHR8 397 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 LRRC72A6NJI9 287 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 TBC1D3LB9A6J9 549 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 PGRMC1O00264 195 aaKnown RBP11.96□□□□□ -0.49
APTX-233ENST00000496030 NDUFS2O75306 463 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 METTL18O95568 372 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 TBC1D3HP0C7X1 549 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 ETS1P14921 441 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 ITPKAP23677 461 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 STIP1P31948 543 aaKnown RBP11.96□□□□□ -0.49
APTX-233ENST00000496030 KCNJ1P48048 391 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 SUOXP51687 545 aa11.96□□□□□ -0.49
APTX-233ENST00000496030 SEMG2Q02383 582 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms