RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 EPHB1P54762 984 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 CLDN2P57739 230 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 SGCGQ13326 291 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 GALNT3Q14435 633 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 KCTD19Q17RG1 926 aaPredicted RBP19.52■□□□□ 0.72
HDAC4-212ENST00000495497 NAPEPLDQ6IQ20 393 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 KDELC1Q6UW63 502 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 LIPIQ6XZB0 460 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 PRR23CQ6ZRP0 262 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 PRUNE1Q86TP1 453 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 TSPAN33Q86UF1 283 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 SPATA13Q96N96 652 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 TRIB3Q96RU7 358 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 GBA3Q9H227 469 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 CAPN10Q9HC96 672 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 FAM153AQ9UHL3 310 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 SLC6A14Q9UN76 642 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 ZNF148Q9UQR1 794 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 PPIL1Q9Y3C6 166 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 ANKRD36A6QL64 1941 aa19.52■□□□□ 0.72
HDAC4-212ENST00000495497 A0A0J9YYE9 177 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 A0A1B0GVT2 93 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 C5orf60A6NFR6 353 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 H0Y8X5 98 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 TM7SF2O76062 418 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 TRBC1P01850 177 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 C6P13671 934 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 CA4P22748 312 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 VIPR1P32241 457 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 RACK1P63244 317 aaKnown RBP19.51■□□□□ 0.71
HDAC4-212ENST00000495497 BNC1Q01954 994 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 CDK18Q07002 472 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 CCNG2Q16589 344 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 QPCTQ16769 361 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 DENND2CQ68D51 928 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 ITPRIPL1Q6GPH6 555 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 KDM7AQ6ZMT4 941 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 TAB3Q8N5C8 712 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-212ENST00000495497 MAIP1Q8WWC4 291 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 RMDN1Q96DB5 314 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 SCRN2Q96FV2 425 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 MRGPRX2Q96LB1 330 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 MCCC1Q96RQ3 725 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-212ENST00000495497 MLPHQ9BV36 600 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-212ENST00000495497 AP1M1Q9BXS5 423 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 NUSAP1Q9BXS6 441 aaKnown RBP19.51■□□□□ 0.71
HDAC4-212ENST00000495497 FRMD8P1Q9BZ68 369 aaPredicted RBP19.51■□□□□ 0.71
HDAC4-212ENST00000495497 TPX2Q9ULW0 747 aaKnown RBP19.51■□□□□ 0.71
HDAC4-212ENST00000495497 DMTF1Q9Y222 760 aa19.51■□□□□ 0.71
HDAC4-212ENST00000495497 A0A1W2PR77 199 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 PRR5-ARHGAP8B1AHC4 643 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 PRAMEF26H0Y7S4 382 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 LZTS3O60299 673 aaPredicted RBP19.5■□□□□ 0.71
HDAC4-212ENST00000495497 GDF9O60383 454 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 ELFN1P0C7U0 828 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 CYP2A6P11509 494 aaPredicted RBP19.5■□□□□ 0.71
HDAC4-212ENST00000495497 ETS1P14921 441 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 HNRNPA2B1P22626 353 aaKnown RBP19.5■□□□□ 0.71
HDAC4-212ENST00000495497 LHCGRP22888 699 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 CD38P28907 300 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 KCNJ1P48048 391 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 AFF3P51826 1226 aaKnown RBP19.5■□□□□ 0.71
HDAC4-212ENST00000495497 WNT3AP56704 352 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 CNGA3Q16281 694 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 CRTC1Q6UUV9 634 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 USP45Q70EL2 814 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 RABEPKQ7Z6M1 372 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 PRELID2Q8N945 189 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 C12orf50Q8NA57 414 aaPredicted RBP19.5■□□□□ 0.71
HDAC4-212ENST00000495497 IPMKQ8NFU5 416 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 OR2I1PQ8NGU4 316 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 IFT43Q96FT9 208 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 NAPGQ99747 312 aaPredicted RBP19.5■□□□□ 0.71
HDAC4-212ENST00000495497 MBNL1Q9NR56 388 aaKnown RBP19.5■□□□□ 0.71
HDAC4-212ENST00000495497 PLXNA2O75051 1894 aa19.5■□□□□ 0.71
HDAC4-212ENST00000495497 LNP1A1A4G5 178 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 CFAP69A5D8W1 941 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 ANKRD66B4E2M5 251 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 GCATO75600 419 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 METTL18O95568 372 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 IFNB1P01574 187 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 PIRTP0C851 137 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 GM2AP17900 193 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 AKT2P31751 481 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 NUDT1P36639 197 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 OLIG2Q13516 323 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 STAT4Q14765 748 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 SLC14A2Q15849 920 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 AASDHQ4L235 1098 aaPredicted RBP19.49■□□□□ 0.71
HDAC4-212ENST00000495497 FAXCQ5TGI0 409 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 GCNT7Q6ZNI0 430 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 ARHGEF18Q6ZSZ5 1173 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 NDUFAF2Q8N183 169 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 SLC25A41Q8N5S1 370 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 GLIS1Q8NBF1 620 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 TMEM145Q8NBT3 493 aa19.49■□□□□ 0.71
HDAC4-212ENST00000495497 KLF6Q99612 283 aaPredicted RBP19.49■□□□□ 0.71
HDAC4-212ENST00000495497 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.49■□□□□ 0.71
HDAC4-212ENST00000495497 TTC7AQ9ULT0 858 aaPredicted RBP19.49■□□□□ 0.71
HDAC4-212ENST00000495497 PGRMC1O00264 195 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms