RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 UBE2OQ9C0C9 1292 aaKnown RBP13.51□□□□□ -0.25
GPC1-209ENST00000495100 VRTNQ9H8Y1 702 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 HPS4Q9NQG7 708 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 SUN2Q9UH99 717 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 KCNH4Q9UQ05 1017 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 PHIPQ8WWQ0 1821 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 HEATR9A2RTY3 570 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 CASQ2O14958 399 aaPredicted RBP13.51□□□□□ -0.25
GPC1-209ENST00000495100 F2P00734 622 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 AGTR2P50052 363 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 DPYSQ14117 519 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 LRRC23Q53EV4 343 aaPredicted RBP13.51□□□□□ -0.25
GPC1-209ENST00000495100 EPGNQ6UW88 154 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 TMCO2Q7Z6W1 182 aaPredicted RBP13.51□□□□□ -0.25
GPC1-209ENST00000495100 RNF145Q96MT1 663 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 IGSF9Q9P2J2 1179 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 HS3ST4Q9Y661 456 aa13.51□□□□□ -0.25
GPC1-209ENST00000495100 ASCC3Q8N3C0 2202 aaKnown RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 KLF11O14901 512 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 MTSS1O43312 755 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 CABYRO75952 493 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 ZBTB11O95625 1053 aaPredicted RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 MLNP12872 115 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 GKP32189 559 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 CPOXP36551 454 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 FOXB2Q5VYV0 432 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 PRSS55Q6UWB4 352 aaPredicted RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 CARNMT1Q8N4J0 409 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 CANT1Q8WVQ1 401 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 EFHD1Q9BUP0 239 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 THUMPD3Q9BV44 507 aaKnown RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 ING2Q9H160 280 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 BCAP29Q9UHQ4 241 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 CROTQ9UKG9 612 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 IQCA1LA6NCM1 817 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 UPK3BL1B0FP48 263 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 UPK3BL2E5RIL1 263 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 GSTA4O15217 222 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 MGEA5O60502 916 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 E2F6O75461 281 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 RNASEH2AO75792 299 aaKnown RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 CRTAMO95727 393 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 SLC2A3P11169 496 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 DIO3P55073 304 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 ENPEPQ07075 957 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 TSNQ15631 228 aaKnown RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 RABL3Q5HYI8 236 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 FBXL19Q6PCT2 694 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 TTC33Q6PID6 262 aaPredicted RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 FNDC5Q8NAU1 212 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 MMADHCQ9H3L0 296 aaPredicted RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 CDH9Q9ULB4 789 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 TRPV2Q9Y5S1 764 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 LTBP3Q9NS15 1303 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 ARID1BQ8NFD5 2236 aaPredicted RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 MATN2O00339 956 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 NCAM2O15394 837 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 SNUPNO95149 360 aaKnown RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 C1QAP02745 245 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 LTA4HP09960 611 aaKnown RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 ATP5F1P24539 256 aaPredicted RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 CDK7P50613 346 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 KPNA2P52292 529 aaKnown RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 RAP1GDS1P52306 607 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 FOXA1P55317 472 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 CCL23P55773 120 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 TBCCQ15814 346 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 TPGS1Q6ZTW0 290 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 CACUL1Q86Y37 369 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 CLEC4FQ8N1N0 589 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 EML4Q9HC35 981 aaKnown RBP13.5□□□□□ -0.25
GPC1-209ENST00000495100 NMRK2Q9NPI5 230 aa13.5□□□□□ -0.25
GPC1-209ENST00000495100 NPEPPSL1A6NEC2 478 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 A8MT66 165 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 H3BSA7 217 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 PIP5K1BO14986 540 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 KCNC1P48547 511 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 RENBPP51606 427 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 LAMB3Q13751 1172 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 ZBTB6Q15916 424 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 KCNA10Q16322 511 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 ZYG11AQ6WRX3 759 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 GABPB2Q8TAK5 448 aaPredicted RBP13.49□□□□□ -0.25
GPC1-209ENST00000495100 ZIC5Q96T25 663 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 GPR63Q9BZJ6 419 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 TCAF1Q9Y4C2 921 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 TRPC5OSA6NMA1 111 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 IPO13O94829 963 aaKnown RBP13.49□□□□□ -0.25
GPC1-209ENST00000495100 GSRP00390 522 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 GOT2P00505 430 aaKnown RBP13.49□□□□□ -0.25
GPC1-209ENST00000495100 CHRNA1P02708 482 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 HSPA8P11142 646 aaKnown RBP13.49□□□□□ -0.25
GPC1-209ENST00000495100 EEF1DP29692 281 aaKnown RBP13.49□□□□□ -0.25
GPC1-209ENST00000495100 STX5Q13190 355 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 INTS6LQ5JSJ4 861 aaKnown RBP13.49□□□□□ -0.25
GPC1-209ENST00000495100 DHFR2Q86XF0 187 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 CLVS1Q8IUQ0 354 aaPredicted RBP13.49□□□□□ -0.25
GPC1-209ENST00000495100 MFSD6LQ8IWD5 586 aa13.49□□□□□ -0.25
GPC1-209ENST00000495100 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.49□□□□□ -0.25
GPC1-209ENST00000495100 FBXO30Q8TB52 745 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms