RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	FLCN	Q8NFG4	579 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	CAVIN3	Q969G5	261 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	STAMBPL1	Q96FJ0	436 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	OMD	Q99983	421 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	APOL2	Q9BQE5	337 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	ZDHHC4	Q9NPG8	344 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	KCTD5	Q9NXV2	234 aa		13.61	□□□□□ -0.23
APTX-231	ENST00000494973	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
APTX-231	ENST00000494973	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
APTX-231	ENST00000494973	UQCRHL	A0A096LP55	91 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	AP1G1	O43747	822 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	ZNF217	O75362	1048 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	APBB3	O95704	486 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	POLB	P06746	335 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	UQCRH	P07919	91 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	PDHA1	P08559	390 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	ADRB3	P13945	408 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	AOC1	P19801	751 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	VIPR1	P32241	457 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	PHB	P35232	272 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	CHRNA4	P43681	627 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	DHX9	Q08211	1270 aa	Known RBP	13.6	□□□□□ -0.23
APTX-231	ENST00000494973	FZD5	Q13467	585 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	IHH	Q14623	411 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	TAF1A	Q15573	450 aa	Predicted RBP	13.6	□□□□□ -0.23
APTX-231	ENST00000494973	KIAA1211L	Q6NV74	962 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	DPPA4	Q7L190	304 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	KDELC2	Q7Z4H8	507 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	TTC7B	Q86TV6	843 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	ZBED8	Q8IZ13	594 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	BLOC1S5	Q8TDH9	187 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	GANC	Q8TET4	914 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	PYROXD1	Q8WU10	500 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	EBNA1BP2	Q99848	306 aa	Known RBP	13.6	□□□□□ -0.23
APTX-231	ENST00000494973	CDH19	Q9H159	772 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	KDM4C	Q9H3R0	1056 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	CD248	Q9HCU0	757 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	SAYSD1	Q9NPB0	183 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	SOX13	Q9UN79	622 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	ZNF711	Q9Y462	761 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	MTF2	Q9Y483	593 aa	Predicted RBP	13.6	□□□□□ -0.23
APTX-231	ENST00000494973	TCAF1	Q9Y4C2	921 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	MAD1L1	Q9Y6D9	718 aa		13.6	□□□□□ -0.23
APTX-231	ENST00000494973	FAM237B	A0A1B0GVD1	139 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	RGSL1	A5PLK6	1076 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	TMEM221	A6NGB7	291 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973		M0R296	226 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	NEMP1	O14524	444 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	MID1	O15344	667 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	TSPAN6	O43657	245 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	USP1	O94782	785 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	COL9A1	P20849	921 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	MGAT1	P26572	445 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	OXTR	P30559	389 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	HADHA	P40939	763 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	GRIA1	P42261	906 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	SEPT6	Q14141	434 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	POU6F1	Q14863	301 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	TRADD	Q15628	312 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	SKIDA1	Q1XH10	827 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	PKN3	Q6P5Z2	889 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	ZNF449	Q6P9G9	518 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.59	□□□□□ -0.23
APTX-231	ENST00000494973	PALM2	Q8IXS6	379 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	AEN	Q8WTP8	325 aa	Known RBP	13.59	□□□□□ -0.23
APTX-231	ENST00000494973	STYX	Q8WUJ0	223 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	HNRNPLL	Q8WVV9	542 aa	Known RBP	13.59	□□□□□ -0.23
APTX-231	ENST00000494973	FAM131C	Q96AQ9	280 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	ARRDC3	Q96B67	414 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	MRGPRX1	Q96LB2	322 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	NSMCE3	Q96MG7	304 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	HINFP	Q9BQA5	517 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	KIFC1	Q9BW19	673 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	GPR63	Q9BZJ6	419 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	MKRN2	Q9H000	416 aa	Known RBP	13.59	□□□□□ -0.23
APTX-231	ENST00000494973	NEUROG2	Q9H2A3	272 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	EPC1	Q9H2F5	836 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	ZFYVE1	Q9HBF4	777 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	PCDH12	Q9NPG4	1184 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	FBXL12	Q9NXK8	326 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.59	□□□□□ -0.23
APTX-231	ENST00000494973	SARDH	Q9UL12	918 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	PKP3	Q9Y446	797 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	TEX264	Q9Y6I9	313 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	COL6A3	P12111	3177 aa		13.59	□□□□□ -0.23
APTX-231	ENST00000494973	C1orf232	A0A0U1RR37	186 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	RNASEH2A	O75792	299 aa	Known RBP	13.58	□□□□□ -0.24
APTX-231	ENST00000494973	TIMP2	P16035	220 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	GABRG2	P18507	467 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	NDUFV2	P19404	249 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	LPO	P22079	712 aa	Predicted RBP	13.58	□□□□□ -0.24
APTX-231	ENST00000494973	STX2	P32856	288 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	HMGCL	P35914	325 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	MMP12	P39900	470 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	P2RY2	P41231	377 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	MAGEA4	P43358	317 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	CXCL12	P48061	93 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	PTPN5	P54829	565 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	FAM193A	P78312	1265 aa		13.58	□□□□□ -0.24
APTX-231	ENST00000494973	ILF2	Q12905	390 aa	Known RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms