RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 PISDQ9UG56 409 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 MOSPD1Q9UJG1 213 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 ATP8A1Q9Y2Q0 1164 aa12.73□□□□□ -0.37
SKA1-205ENST00000494518 BSNQ9UPA5 3926 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 TSPAN11A1L157 253 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 TTC24A2A3L6 582 aaPredicted RBP12.72□□□□□ -0.37
SKA1-205ENST00000494518 TMEM202A6NGA9 273 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 WASH4PA8MWX3 477 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 TMCO5BA8MYB1 307 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 J3QKU1 62 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 K7ENP7 123 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 PLD2O14939 933 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 PRAMEF11O60813 436 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 ITGA2BP08514 1039 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 SLC5A2P31639 672 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 UGT1A5P35504 534 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 PEX5P50542 639 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 PAPOLAP51003 745 aaKnown RBP12.72□□□□□ -0.37
SKA1-205ENST00000494518 INHBCP55103 352 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 UBXN1Q04323 297 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 RALGDSQ12967 914 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 PPP1R15BQ5SWA1 713 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 INO80CQ6PI98 192 aaPredicted RBP12.72□□□□□ -0.37
SKA1-205ENST00000494518 ARHGAP36Q6ZRI8 547 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 RAB11FIP2Q7L804 512 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 SRLQ86TD4 932 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 TSEN2Q8NCE0 465 aaKnown RBP12.72□□□□□ -0.37
SKA1-205ENST00000494518 WDR48Q8TAF3 677 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 CCDC97Q96F63 343 aaPredicted RBP12.72□□□□□ -0.37
SKA1-205ENST00000494518 LIN37Q96GY3 246 aaPredicted RBP12.72□□□□□ -0.37
SKA1-205ENST00000494518 CNPY3Q9BT09 278 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 LRRN3Q9H3W5 708 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 DHX35Q9H5Z1 703 aaKnown RBP12.72□□□□□ -0.37
SKA1-205ENST00000494518 FGF22Q9HCT0 170 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 PCSK1NQ9UHG2 260 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 AP4E1Q9UPM8 1137 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 NAV2Q8IVL1 2488 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 MAST4O15021 2626 aa12.72□□□□□ -0.37
SKA1-205ENST00000494518 SDK2Q58EX2 2172 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 TMEM110-MUSTN1A8MSY1 372 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 LGALS16A8MUM7 142 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 B4DGG1 531 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 DFFAO00273 331 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 EEF2KO00418 725 aaKnown RBP12.71□□□□□ -0.37
SKA1-205ENST00000494518 TOR1BO14657 336 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 FGF10O15520 208 aaPredicted RBP12.71□□□□□ -0.37
SKA1-205ENST00000494518 PALMO75781 387 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 TNFP01375 233 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 ITIH1P19827 911 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 PSMA2P25787 234 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 MTM1Q13496 603 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 CT47A1Q5JQC4 288 aaPredicted RBP12.71□□□□□ -0.37
SKA1-205ENST00000494518 TAF8Q7Z7C8 310 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 CCNJLQ8IV13 435 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 MCOLN2Q8IZK6 566 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 PELI3Q8N2H9 469 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 FAM46DQ8NEK8 389 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 CCL4L1Q8NHW4 92 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 FUBP1Q96AE4 644 aaKnown RBP12.71□□□□□ -0.37
SKA1-205ENST00000494518 NSMCE3Q96MG7 304 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 PEBP4Q96S96 227 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 KCTD15Q96SI1 283 aaPredicted RBP12.71□□□□□ -0.37
SKA1-205ENST00000494518 RBM15Q96T37 977 aaKnown RBP eCLIP12.71□□□□□ -0.37
SKA1-205ENST00000494518 CINPQ9BW66 212 aaPredicted RBP12.71□□□□□ -0.37
SKA1-205ENST00000494518 SP110Q9HB58 689 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 LOXL2Q9Y4K0 774 aa12.71□□□□□ -0.37
SKA1-205ENST00000494518 ARHGAP42A6NI28 874 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 CACNB4O00305 520 aaPredicted RBP12.7□□□□□ -0.38
SKA1-205ENST00000494518 TEX33O43247 280 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 EFSO43281 561 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 DAPK3O43293 454 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 RECQL5O94762 991 aaPredicted RBP12.7□□□□□ -0.38
SKA1-205ENST00000494518 ELFN1P0C7U0 828 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 JMJD7P0C870 316 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 SERPINA4P29622 427 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 ETV5P41161 510 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 SUOXP51687 545 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 NDST2P52849 883 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 PPP6R3Q5H9R7 873 aaPredicted RBP12.7□□□□□ -0.38
SKA1-205ENST00000494518 ACAD10Q6JQN1 1059 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 BRAT1Q6PJG6 821 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 LVRNQ6Q4G3 990 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 VASH2Q86V25 355 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 TP53INP2Q8IXH6 220 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 NPWQ8N729 165 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 GPR156Q8NFN8 814 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 OR56A4Q8NGH8 313 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 ATL2Q8NHH9 583 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 SNRNP27Q8WVK2 155 aaKnown RBP12.7□□□□□ -0.38
SKA1-205ENST00000494518 WBP1Q96G27 269 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 ZNF641Q96N77 438 aaPredicted RBP12.7□□□□□ -0.38
SKA1-205ENST00000494518 CCNL2Q96S94 520 aaPredicted RBP12.7□□□□□ -0.38
SKA1-205ENST00000494518 SNRNP25Q9BV90 132 aaKnown RBP12.7□□□□□ -0.38
SKA1-205ENST00000494518 LGR4Q9BXB1 951 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 TRIM7Q9C029 511 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 STRADBQ9C0K7 418 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 TMEM168Q9H0V1 697 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 ATP13A3Q9H7F0 1226 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 CYP4F12Q9HCS2 524 aa12.7□□□□□ -0.38
SKA1-205ENST00000494518 LMBRD1Q9NUN5 540 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms