RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 MYLK3Q32MK0 819 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 ZNF697Q5TEC3 545 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 MROH9Q5TGP6 573 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 TTC19Q6DKK2 380 aaPredicted RBP6.82□□□□□ -1.32
MSH5-217ENST00000494458 TMC5Q6UXY8 1006 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 LINGO4Q6UY18 593 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 TPGS1Q6ZTW0 290 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 CCDC91Q7Z6B0 441 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 RASSF3Q86WH2 238 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 ZNF354CQ86Y25 554 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 RAVER1Q8IY67 606 aaKnown RBP6.82□□□□□ -1.32
MSH5-217ENST00000494458 TDHQ8IZJ6 230 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 DCLK2Q8N568 766 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 SLC25A41Q8N5S1 370 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 ANKS4BQ8N8V4 417 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 OR2AP1Q8NGE2 309 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 GRIN3AQ8TCU5 1115 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 BPIFB1Q8TDL5 484 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 BCAS4Q8TDM0 211 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 WFIKKN2Q8TEU8 576 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 GDPD5Q8WTR4 605 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 ASIC4Q96FT7 647 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 IFT43Q96FT9 208 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 VPS39Q96JC1 886 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 UBXN10Q96LJ8 280 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 ZNF641Q96N77 438 aaPredicted RBP6.82□□□□□ -1.32
MSH5-217ENST00000494458 GPR78Q96P69 363 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 MCCC1Q96RQ3 725 aaPredicted RBP6.82□□□□□ -1.32
MSH5-217ENST00000494458 TCF12Q99081 682 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 SELENOSQ9BQE4 189 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 BBS2Q9BXC9 721 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 ADGRE3Q9BY15 652 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 NSUN3Q9H649 340 aaKnown RBP6.82□□□□□ -1.32
MSH5-217ENST00000494458 KCNK9Q9NPC2 374 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 IARS2Q9NSE4 1012 aaKnown RBP6.82□□□□□ -1.32
MSH5-217ENST00000494458 NKIRAS1Q9NYS0 192 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.82□□□□□ -1.32
MSH5-217ENST00000494458 IL17CQ9P0M4 197 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 SLC17A7Q9P2U7 560 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 SLC17A6Q9P2U8 582 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 FBXO5Q9UKT4 447 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 CORO1CQ9ULV4 474 aaPredicted RBP6.82□□□□□ -1.32
MSH5-217ENST00000494458 CHKBQ9Y259 395 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 PCDHGC4Q9Y5F7 938 aa6.82□□□□□ -1.32
MSH5-217ENST00000494458 TMEM265A0A087WTH1 108 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 TRBV5-4A0A0C4DH59 114 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 A0A0J9YYE9 177 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 ARNTLO00327 626 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 COPEO14579 308 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 TPP1O14773 563 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 SCAMP3O14828 347 aaKnown RBP6.81□□□□□ -1.32
MSH5-217ENST00000494458 AURKAO14965 403 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 SNX3O60493 162 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 PLIN3O60664 434 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 RPP40O75818 363 aaKnown RBP6.81□□□□□ -1.32
MSH5-217ENST00000494458 HAUS5O94927 633 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 TGDSO95455 350 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 CRTAMO95727 393 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 TRBC1P01850 177 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 PROCP04070 461 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 ASLP04424 464 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 C2P06681 752 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 SRPRAP08240 638 aaKnown RBP6.81□□□□□ -1.32
MSH5-217ENST00000494458 SBK3P0C264 359 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 LPOP22079 712 aaPredicted RBP6.81□□□□□ -1.32
MSH5-217ENST00000494458 FSHRP23945 695 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 CRABP2P29373 138 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 LTBRP36941 435 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 EIF2DP41214 584 aaKnown RBP6.81□□□□□ -1.32
MSH5-217ENST00000494458 SLC1A2P43004 574 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 CTSOP43234 321 aaPredicted RBP6.81□□□□□ -1.32
MSH5-217ENST00000494458 SERPINB4P48594 390 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 SERPINB8P50452 374 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 CLCN5P51795 746 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 RHOAP61586 193 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 SNRPD1P62314 119 aaKnown RBP6.81□□□□□ -1.32
MSH5-217ENST00000494458 ECT2LQ008S8 904 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 POU4F1Q01851 419 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 DMTNQ08495 405 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 BMPR2Q13873 1038 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 PDGFRLQ15198 375 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 CARD16Q5EG05 197 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 ARMC12Q5T9G4 340 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 MBLAC2Q68D91 279 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 CGB2Q6NT52 195 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 LVRNQ6Q4G3 990 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 DENND6AQ8IWF6 608 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 LRRC34Q8IZ02 419 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 AHI1Q8N157 1196 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 NDUFAF2Q8N183 169 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 ACVR1CQ8NER5 493 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 OR2A12Q8NGT7 310 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 ZNF473Q8WTR7 871 aaKnown RBP6.81□□□□□ -1.32
MSH5-217ENST00000494458 ZNF75CPQ92670 426 aaPredicted RBP6.81□□□□□ -1.32
MSH5-217ENST00000494458 PTPRN2Q92932 1015 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 PPP2R3CQ969Q6 453 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 HDAC10Q969S8 669 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 TIFAQ96CG3 184 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 GRAMD1AQ96CP6 724 aa6.81□□□□□ -1.32
MSH5-217ENST00000494458 MRRFQ96E11 262 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms