RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	IFT43	Q96FT9	208 aa		10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	PBK	Q96KB5	322 aa		10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	NSMCE3	Q96MG7	304 aa		10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	MCCC1	Q96RQ3	725 aa	Predicted RBP	10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	RBM15	Q96T37	977 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	NAP1L3	Q99457	506 aa	Predicted RBP	10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	FAM118B	Q9BPY3	351 aa		10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	EDEM2	Q9BV94	578 aa		10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	GBA3	Q9H227	469 aa		10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	EBF2	Q9HAK2	575 aa		10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	PCDH9	Q9HC56	1237 aa		10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	RSPH14	Q9UHP6	348 aa		10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	PYCARD	Q9ULZ3	195 aa		10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	CHKB	Q9Y259	395 aa		10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	FRYL	O94915	3013 aa		10.04	□□□□□ -0.8
MACF1-222	ENST00000494012	PTPRZ1	P23471	2315 aa	Predicted RBP	10.04	□□□□□ -0.8
MACF1-222	ENST00000494012		A0A0J9YYE9	177 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	TCRBV7S2A1N4T	A0A589	114 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	GOLGA6C	A6NDK9	693 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	GOLGA6B	A6NDN3	693 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	USP27X	A6NNY8	438 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012		A6NNZ2	444 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	PSMD11	O00231	422 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	FPGT	O14772	594 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	LIAS	O43766	372 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	LZTS3	O60299	673 aa	Predicted RBP	10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	CEP104	O60308	925 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	OPHN1	O60890	802 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	CER1	O95813	267 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	PAK4	O96013	591 aa	Predicted RBP	10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	TRBC1	P01850	177 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	PRKCG	P05129	697 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	PDHA1	P08559	390 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	GOLGA6D	P0CG33	693 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	C6	P13671	934 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	ZNF30	P17039	623 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	VIPR1	P32241	457 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	CXCR5	P32302	372 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	CSNK1E	P49674	416 aa	Known RBP	10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	LIG3	P49916	1009 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	LIMK1	P53667	647 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	RALGDS	Q12967	914 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	GRIK2	Q13002	908 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	MPP3	Q13368	585 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	PRPSAP1	Q14558	356 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	AGER	Q15109	404 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	CCDC70	Q6NSX1	233 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	ARHGEF18	Q6ZSZ5	1173 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	SLC35F6	Q8N357	371 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	LPCAT1	Q8NF37	534 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	NETO1	Q8TDF5	533 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	PIH1D2	Q8WWB5	315 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	KLK6	Q92876	244 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	TADA1	Q96BN2	335 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	RMDN1	Q96DB5	314 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	SPATA13	Q96N96	652 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	LENG8	Q96PV6	779 aa	Predicted RBP	10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	FCRL5	Q96RD9	977 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	SRPK1	Q96SB4	655 aa	Known RBP	10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	GTPBP2	Q9BX10	602 aa	Known RBP	10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	FSD1L	Q9BXM9	530 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	TMEM9B	Q9NQ34	198 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	KCND1	Q9NSA2	647 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	HOMER3	Q9NSC5	361 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	KCTD5	Q9NXV2	234 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	GOLGA6A	Q9NYA3	693 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	B4GALT6	Q9UBX8	382 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	FAM153A	Q9UHL3	310 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	R3HDM2	Q9Y2K5	976 aa	Known RBP	10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	AAR2	Q9Y312	384 aa	Known RBP	10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	PPIL1	Q9Y3C6	166 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	SLCO1B1	Q9Y6L6	691 aa		10.03	□□□□□ -0.8
MACF1-222	ENST00000494012	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	10.02	□□□□□ -0.81
MACF1-222	ENST00000494012		A0A1B0GVT2	93 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012		A0A1W2PR77	199 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	C5orf60	A6NFR6	353 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	NPIPB15	A6NHN6	443 aa	Predicted RBP	10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	ANKRD66	B4E2M5	251 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	TLR4	O00206	839 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	CES2	O00748	559 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	TOR1B	O14657	336 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	DFNA5	O60443	496 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	ABCB7	O75027	752 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	PMPCB	O75439	489 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	HEXIM1	O94992	359 aa	Known RBP	10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	MT-CYB	P00156	380 aa	Predicted RBP	10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	EPO	P01588	193 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	ATP1A1	P05023	1023 aa	Known RBP	10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	ITIH2	P19823	946 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	STIP1	P31948	543 aa	Known RBP	10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	CD68	P34810	354 aa	Predicted RBP	10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	ACTN2	P35609	894 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	RABIF	P47224	123 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	GEM	P55040	296 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	GNG11	P61952	73 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	CDK18	Q07002	472 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	FGL2	Q14314	439 aa		10.02	□□□□□ -0.81
MACF1-222	ENST00000494012	IHH	Q14623	411 aa		10.02	□□□□□ -0.81

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