RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 B4GALT6Q9UBX8 382 aa11.73□□□□□ -0.53
UBA3-211ENST00000493957 ANKRD6Q9Y2G4 727 aa11.73□□□□□ -0.53
UBA3-211ENST00000493957 FNDC3AQ9Y2H6 1198 aaKnown RBP11.73□□□□□ -0.53
UBA3-211ENST00000493957 R3HDM2Q9Y2K5 976 aaKnown RBP11.73□□□□□ -0.53
UBA3-211ENST00000493957 PCDHB9Q9Y5E1 797 aa11.73□□□□□ -0.53
UBA3-211ENST00000493957 RAI2Q9Y5P3 530 aa11.73□□□□□ -0.53
UBA3-211ENST00000493957 POM121BA6NF01 834 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 PRR5-ARHGAP8B1AHC4 643 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 VILLO15195 856 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 FZD6O60353 706 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 SOCS5O75159 536 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 NEBLO76041 1014 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 PGLSO95336 258 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 PRLP01236 227 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 ALPIP09923 528 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 C6P13671 934 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 CTPS1P17812 591 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 GM2AP17900 193 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 HNRNPA2B1P22626 353 aaKnown RBP11.72□□□□□ -0.53
UBA3-211ENST00000493957 CD38P28907 300 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 CD68P34810 354 aaPredicted RBP11.72□□□□□ -0.53
UBA3-211ENST00000493957 CD86P42081 329 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 NR2C2P49116 596 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 LIMK1P53667 647 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 FAM193AP78312 1265 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 SKOR1P84550 965 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 IL9RQ01113 521 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 MEI1Q5TIA1 1274 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 ADAT2Q7Z6V5 191 aaKnown RBP11.72□□□□□ -0.53
UBA3-211ENST00000493957 SPATS2Q86XZ4 545 aaKnown RBP11.72□□□□□ -0.53
UBA3-211ENST00000493957 REXO1L1PQ8IX06 675 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 UBL4BQ8N7F7 174 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 PAF1Q8N7H5 531 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 OR13H1Q8NG92 308 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 NETO1Q8TDF5 533 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 HCAR2Q8TDS4 363 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 CXorf40AQ8TE69 158 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 TFB1MQ8WVM0 346 aaKnown RBP11.72□□□□□ -0.53
UBA3-211ENST00000493957 PIH1D2Q8WWB5 315 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 RBM15Q96T37 977 aaKnown RBP eCLIP11.72□□□□□ -0.53
UBA3-211ENST00000493957 CDV3Q9UKY7 258 aaKnown RBP11.72□□□□□ -0.53
UBA3-211ENST00000493957 DMTF1Q9Y222 760 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 CHKBQ9Y259 395 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 PLXNB3Q9ULL4 1909 aa11.72□□□□□ -0.53
UBA3-211ENST00000493957 ARHGEF17Q96PE2 2063 aaPredicted RBP11.71□□□□□ -0.53
UBA3-211ENST00000493957 NPIPB15A6NHN6 443 aaPredicted RBP11.71□□□□□ -0.53
UBA3-211ENST00000493957 USP27XA6NNY8 438 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 PRAMEF26H0Y7S4 382 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 H7C0C1 242 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 SLC30A4O14863 429 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 NRDCO43847 1150 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 LHCGRP22888 699 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 RBL1P28749 1068 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 IGFALSP35858 605 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 CTSKP43235 329 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 ATP5OP48047 213 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 LIG3P49916 1009 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 EIF3EP60228 445 aaKnown RBP11.71□□□□□ -0.53
UBA3-211ENST00000493957 ARHGAP8P85298 464 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 ELP6Q0PNE2 266 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 KLF1Q13351 362 aaPredicted RBP11.71□□□□□ -0.53
UBA3-211ENST00000493957 TEAD4Q15561 434 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 HLA-BQ31612 363 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 SLC45A4Q5BKX6 768 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 RALGPS1Q5JS13 557 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 TPRG1LQ5T0D9 272 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 ARMC12Q5T9G4 340 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 CCDC181Q5TID7 509 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 DPPA4Q7L190 304 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 TSPAN33Q86UF1 283 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 LAPTM4BQ86VI4 370 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 ZNF567Q8N184 647 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 SLC22A18ASQ8N1D0 253 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 PELI3Q8N2H9 469 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 TP53I13Q8NBR0 393 aaPredicted RBP11.71□□□□□ -0.53
UBA3-211ENST00000493957 SPATA22Q8NHS9 363 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 IMP4Q96G21 291 aaKnown RBP11.71□□□□□ -0.53
UBA3-211ENST00000493957 BMFQ96LC9 184 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 TLR10Q9BXR5 811 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 TDRD1Q9BXT4 1180 aaKnown RBP11.71□□□□□ -0.53
UBA3-211ENST00000493957 GAREM1Q9H706 876 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 GLOD4Q9HC38 313 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 MBNL1Q9NR56 388 aaKnown RBP11.71□□□□□ -0.53
UBA3-211ENST00000493957 TRMT1Q9NXH9 659 aaKnown RBP11.71□□□□□ -0.53
UBA3-211ENST00000493957 DLL3Q9NYJ7 618 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 UBP1Q9NZI7 540 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 AMACRQ9UHK6 382 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 PYCARDQ9ULZ3 195 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 EFR3BQ9Y2G0 817 aa11.71□□□□□ -0.53
UBA3-211ENST00000493957 ZNF106Q9H2Y7 1883 aaKnown RBP11.71□□□□□ -0.53
UBA3-211ENST00000493957 DCDC2BA2VCK2 349 aa11.7□□□□□ -0.54
UBA3-211ENST00000493957 TLR4O00206 839 aa11.7□□□□□ -0.54
UBA3-211ENST00000493957 TM4SF5O14894 197 aa11.7□□□□□ -0.54
UBA3-211ENST00000493957 FOXD2O60548 495 aaPredicted RBP11.7□□□□□ -0.54
UBA3-211ENST00000493957 TM7SF2O76062 418 aa11.7□□□□□ -0.54
UBA3-211ENST00000493957 MT-CYBP00156 380 aaPredicted RBP11.7□□□□□ -0.54
UBA3-211ENST00000493957 SYPP08247 313 aa11.7□□□□□ -0.54
UBA3-211ENST00000493957 NFKB1P19838 968 aa11.7□□□□□ -0.54
UBA3-211ENST00000493957 AKT2P31751 481 aa11.7□□□□□ -0.54
UBA3-211ENST00000493957 SUOXP51687 545 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms