RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 HEATR9A2RTY3 570 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 PLRG1O43660 514 aaKnown RBP14.98□□□□□ -0.01
ACTB-213ENST00000493945 PPFIA2O75334 1257 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 GJB3O75712 270 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 PCDH8O95206 1070 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 RHOXF2BP0C7M4 288 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 ADRA1AP35348 466 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 RPL21P46778 160 aaKnown RBP14.98□□□□□ -0.01
ACTB-213ENST00000493945 RPS21P63220 83 aaKnown RBP14.98□□□□□ -0.01
ACTB-213ENST00000493945 CSTF1Q05048 431 aaKnown RBP14.98□□□□□ -0.01
ACTB-213ENST00000493945 HIF1AQ16665 826 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 SIRPB2Q5JXA9 342 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 AGBL4Q5VU57 503 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 ZC3H14Q6PJT7 736 aaKnown RBP14.98□□□□□ -0.01
ACTB-213ENST00000493945 RANBP10Q6VN20 620 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 CENPUQ71F23 418 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 DPPA4Q7L190 304 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 GLT6D1Q7Z4J2 308 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 PRUNE1Q86TP1 453 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 WDR5BQ86VZ2 330 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 CCNJLQ8IV13 435 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 NAT8LQ8N9F0 302 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 OR2T34Q8NGX1 318 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 BLOC1S5Q8TDH9 187 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 PIH1D2Q8WWB5 315 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.98□□□□□ -0.013e-6■■■■■ 50.8
ACTB-213ENST00000493945 MCCC1Q96RQ3 725 aaPredicted RBP14.98□□□□□ -0.01
ACTB-213ENST00000493945 TRIB3Q96RU7 358 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 LYSMD1Q96S90 227 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 RHOXF2Q9BQY4 288 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 NAT9Q9BTE0 207 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 GPR63Q9BZJ6 419 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 EPB41L5Q9HCM4 733 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 PCDH12Q9NPG4 1184 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.98□□□□□ -0.01
ACTB-213ENST00000493945 PKD2L2Q9NZM6 624 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 PPIL1Q9Y3C6 166 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 PKP3Q9Y446 797 aa14.98□□□□□ -0.01
ACTB-213ENST00000493945 C1orf232A0A0U1RR37 186 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 ANTXRLA6NF34 631 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 K7ESF4 209 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 RIOK3O14730 519 aaKnown RBP14.97□□□□□ -0.01
ACTB-213ENST00000493945 MAP3K13O43283 966 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 SEMA4FO95754 770 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 AGTP01019 485 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 PAMP19021 973 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 DRD3P35462 400 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 MMP12P39900 470 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 TERF1P54274 439 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 ADPRHP54922 357 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 SLC7A5Q01650 507 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 QPCTQ16769 361 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 PIP5KL1Q5T9C9 394 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 HIBCHQ6NVY1 386 aaPredicted RBP14.97□□□□□ -0.01
ACTB-213ENST00000493945 CASC4Q6P4E1 433 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 AADATQ8N5Z0 425 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 EIF1ADQ8N9N8 165 aaKnown RBP14.97□□□□□ -0.01
ACTB-213ENST00000493945 FOXJ1Q92949 421 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 FAM131CQ96AQ9 280 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 LRRC39Q96DD0 335 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 C19orf43Q9BQ61 176 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 GORASP1Q9BQQ3 440 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 TPSD1Q9BZJ3 242 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 IRF2BPLQ9H1B7 796 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 ZFYVE1Q9HBF4 777 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 CASS4Q9NQ75 786 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 CYP8B1Q9UNU6 501 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 ZNF711Q9Y462 761 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 KMT2EQ8IZD2 1858 aa14.97□□□□□ -0.01
ACTB-213ENST00000493945 TBC1D3DA0A087WVF3 549 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 TBC1D3IA0A087WXS9 549 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 TBC1D3EA0A087X179 549 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 TBC1D3KA0A087X1G2 549 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 MAGEB16A2A368 324 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 RGSL1A5PLK6 1076 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 TBC1D3FA6NER0 549 aaPredicted RBP14.96□□□□□ -0.01
ACTB-213ENST00000493945 TBC1D3LB9A6J9 549 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 EIF3HO15372 352 aaKnown RBP eCLIP14.96□□□□□ -0.01
ACTB-213ENST00000493945 LZTS3O60299 673 aaPredicted RBP14.96□□□□□ -0.01
ACTB-213ENST00000493945 USP12O75317 370 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 TRIOO75962 3097 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 PYGLP06737 847 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 PDHA1P08559 390 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 ATXN1LP0C7T5 689 aaKnown RBP14.96□□□□□ -0.01
ACTB-213ENST00000493945 TBC1D3HP0C7X1 549 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 TIMP2P16035 220 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 HADHAP40939 763 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 SGCGQ13326 291 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 SEPT6Q14141 434 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 SPARCL1Q14515 664 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 TAF1AQ15573 450 aaPredicted RBP14.96□□□□□ -0.01
ACTB-213ENST00000493945 TMEM52BQ4KMG9 183 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 SYCP2LQ5T4T6 812 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 TBC1D3GQ6DHY5 549 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 TBC1D3CQ6IPX1 549 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 FAM124AQ86V42 546 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 TBC1D3Q8IZP1 549 aaPredicted RBP14.96□□□□□ -0.01
ACTB-213ENST00000493945 ZCCHC9Q8N567 271 aaKnown RBP14.96□□□□□ -0.01
ACTB-213ENST00000493945 OR52K1Q8NGK4 314 aa14.96□□□□□ -0.01
ACTB-213ENST00000493945 BRSK1Q8TDC3 778 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms