RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 KCTD4Q8WVF5 259 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 SLC35B4Q969S0 331 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 TADA1Q96BN2 335 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 VN1R3Q9BXE9 311 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 BACE2Q9Y5Z0 518 aa13.86□□□□□ -0.19
VCP-207ENST00000493886 TK2O00142 265 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 DCXO43602 365 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 SLC6A4P31645 630 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 POLE2P56282 527 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 CDC16Q13042 620 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 TMCO4Q5TGY1 634 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 LCA5Q86VQ0 697 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 CEP97Q8IW35 865 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 CENPLQ8N0S6 344 aaPredicted RBP13.85□□□□□ -0.19
VCP-207ENST00000493886 CEP295NLQ96MC4 621 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 FAM96AQ9H5X1 160 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 RUVBL2Q9Y230 463 aaKnown RBP13.85□□□□□ -0.19
VCP-207ENST00000493886 ACOT9Q9Y305 439 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 MICAL3Q7RTP6 2002 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 GOLGA8QA0A0J9YX86 632 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 GOLGA8OA6NCC3 632 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 GOLGA8NF8WBI6 632 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 GJB5O95377 273 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 COL6A2P12110 1019 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 STMN1P16949 149 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 COPAP53621 1224 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 DSG1Q02413 1049 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 CUL3Q13618 768 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 ZNF460Q14592 562 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 FXNQ16595 210 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 C5orf22Q49AR2 442 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 SIRPB2Q5JXA9 342 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 RABGAP1LQ5R372 815 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 KIAA1841Q6NSI8 718 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 TMEM151AQ8N4L1 468 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 PDZD8Q8NEN9 1154 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 RDH11Q8TC12 318 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 IGSF21Q96ID5 467 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 ELMO2Q96JJ3 720 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 SCYL1Q96KG9 808 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 TUBGCP5Q96RT8 1024 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 SEMA3CQ99985 751 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 SLC7A5P2Q9GIP4 190 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 CWH43Q9H720 699 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 OXSMQ9NWU1 459 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 OGDHLQ9ULD0 1010 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 ZNF510Q9Y2H8 683 aa13.85□□□□□ -0.19
VCP-207ENST00000493886 ZNF840PA6NDX5 716 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 TMEM114B3SHH9 223 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 NEMP1O14524 444 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 H2AFYO75367 372 aaKnown RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 PAPSS2O95340 614 aaPredicted RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 PARNO95453 639 aaKnown RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 HSPA4LO95757 839 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 SBK3P0C264 359 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 ALOX15P16050 662 aaPredicted RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 DNAJB1P25685 340 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 GLRBP48167 497 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 IDH3AP50213 366 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 ZNF235Q14590 738 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 ZYG11AQ6WRX3 759 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 KIAA0408Q6ZU52 694 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 HPS6Q86YV9 775 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 RNF168Q8IYW5 571 aaPredicted RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 DEFB107AQ8IZN7 70 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 CALML6Q8TD86 181 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 GATA5Q9BWX5 397 aaPredicted RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 POLR1EQ9GZS1 481 aaKnown RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 EBF3Q9H4W6 596 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 RETREG1Q9H6L5 497 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 DNAJC28Q9NX36 388 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 LOC285095A0A1B0GVY8 99 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 F8W8V4 182 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 ZNF195O14628 629 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 AURKAO14965 403 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 MUSKO15146 869 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 GJB3O75712 270 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 SEC24AO95486 1093 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 ATXN1LP0C7T5 689 aaKnown RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 CRABP2P29373 138 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 CCR10P46092 362 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 SLC11A2P49281 568 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 ASPHQ12797 758 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 TBCCQ15814 346 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 CFAP157Q5JU67 520 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 HECTD3Q5T447 861 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 ANKRD33Q7Z3H0 272 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 ZNF781Q8N8C0 355 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 OR13J1Q8NGT2 312 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 OVCA2Q8WZ82 227 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 ECSITQ9BQ95 431 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 UNKQ9C0B0 810 aaKnown RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 PDFQ9HBH1 243 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 AFF4Q9UHB7 1163 aaKnown RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 A0A0D9SEW6 157 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 AOC1P19801 751 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 ATXN3P54252 364 aaPredicted RBP13.84□□□□□ -0.19
VCP-207ENST00000493886 TAS2R39P59534 338 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 LRRC8EQ6NSJ5 796 aa13.84□□□□□ -0.19
VCP-207ENST00000493886 CNSTQ6PJW8 725 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms