RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, human

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMC4-223	ENST00000493695	SERPINC1	P01008	464 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	CDH1	P12830	882 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	KRT5	P13647	590 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	HSD3B1	P14060	373 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	GJC1	P36383	396 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	PPFIA1	Q13136	1202 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	PRKG1	Q13976	671 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	OASL	Q15646	514 aa	Known RBP	4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	FBXO43	Q4G163	708 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	PAPPA-AS1	Q5QFB9	102 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	FAM122C	Q6P4D5	195 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	SUGP1	Q8IWZ8	645 aa	Known RBP	4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	LTV1	Q96GA3	475 aa	Predicted RBP	4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	KXD1	Q9BQD3	176 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	CTDSP1	Q9GZU7	261 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	FAF1	Q9UNN5	650 aa	Predicted RBP	4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	DGKB	Q9Y6T7	804 aa		4.16	□□□□□ -1.74
SMC4-223	ENST00000493695	CPED1	A4D0V7	1026 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	ZNF587B	E7ETH6	402 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695		E7EVH7	732 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	SOCS6	O14544	535 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	MID1	O15344	667 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	CSF1	P09603	554 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	ADD2	P35612	726 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	TIMP3	P35625	211 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	NR0B1	P51843	470 aa	Known RBP	4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	THOC5	Q13769	683 aa	Known RBP	4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	SH2D4B	Q5SQS7	431 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	MOGAT3	Q86VF5	341 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	CERS3	Q8IU89	383 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	HERC6	Q8IVU3	1022 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	ODF3L1	Q8IXM7	274 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	SETD9	Q8NE22	299 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	ZMIZ2	Q8NF64	920 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	MYRIP	Q8NFW9	859 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	THAP4	Q8WY91	577 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	RBM17	Q96I25	401 aa	Known RBP	4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	ZNF583	Q96ND8	569 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	SAYSD1	Q9NPB0	183 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	G6PC2	Q9NQR9	355 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	NDRG3	Q9UGV2	375 aa		4.15	□□□□□ -1.75
SMC4-223	ENST00000493695	COL2A1	P02458	1487 aa	Predicted RBP	4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	FAM90A20P	A6NIJ5	464 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695		H0Y3Z8	333 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	MTA2	O94776	668 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	ADA	P00813	363 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	WEE2	P0C1S8	567 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	SRC	P12931	536 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	SMAD1	Q15797	465 aa	Known RBP	4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	RPE65	Q16518	533 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	TMEM30B	Q3MIR4	351 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	KRBA2	Q6ZNG9	492 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	SRBD1	Q8N5C6	995 aa	Known RBP	4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	OR6Y1	Q8NGX8	325 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	GDPD5	Q8WTR4	605 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	HSPH1	Q92598	858 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	ERGIC1	Q969X5	290 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	PAGR1	Q9BTK6	254 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	HERC2P3	Q9BVR0	1158 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	NPL	Q9BXD5	320 aa	Predicted RBP	4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	ITM2C	Q9NQX7	267 aa		4.14	□□□□□ -1.75
SMC4-223	ENST00000493695	TLR8	Q9NR97	1041 aa	Known RBP	4.14	□□□□□ -1.75
SMC4-223	ENST00000493695		A0A1W2PS18	150 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	ASPDH	A6ND91	283 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695		B9A039	149 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	TK1	P04183	234 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	CCT5	P48643	541 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	CENPA	P49450	140 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	MCM2	P49736	904 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	REL	Q04864	619 aa	Predicted RBP	4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	SLC20A2	Q08357	652 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	ITGAD	Q13349	1161 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	FBXO47	Q5MNV8	452 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	KRTAP7-1	Q8IUC3	87 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	PARP16	Q8N5Y8	322 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	SLC24A4	Q8NFF2	622 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	BBS10	Q8TAM1	723 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	CSGALNACT1	Q8TDX6	532 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	GCC1	Q96CN9	775 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	CHMP4A	Q9BY43	222 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	PGAP2	Q9UHJ9	254 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	RALY	Q9UKM9	306 aa	Known RBP	4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	KCNK7	Q9Y2U2	307 aa		4.13	□□□□□ -1.75
SMC4-223	ENST00000493695	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	PMS2P5	A8MQ11	134 aa		4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	CREB3	O43889	395 aa		4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	NDUFS7	O75251	213 aa		4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	TTK	P33981	857 aa		4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	GNL1	P36915	607 aa	Predicted RBP	4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	TMPO	P42166	694 aa	Known RBP	4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	PRKAA2	P54646	552 aa		4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	EDRF1	Q3B7T1	1238 aa		4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	ZNF876P	Q49A33	203 aa		4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	IL20RB	Q6UXL0	311 aa		4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	CYP26C1	Q6V0L0	522 aa		4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	CPXCR1	Q8N123	301 aa		4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	LINS1	Q8NG48	757 aa		4.12	□□□□□ -1.75
SMC4-223	ENST00000493695	FAM76A	Q8TAV0	307 aa		4.12	□□□□□ -1.75

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