RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 TTC34A8MYJ7 566 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 H3BRJ5 948 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 SNAP91O60641 907 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 PRAMEF11O60813 436 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 IPO7O95373 1038 aaKnown RBP6.84□□□□□ -1.31
VPS52-219ENST00000493379 EPHX1P07099 455 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 CD48P09326 243 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 CTNNA2P26232 953 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 CTNNA1P35221 906 aaKnown RBP6.84□□□□□ -1.31
VPS52-219ENST00000493379 PTPN7P35236 360 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 ACVRL1P37023 503 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 NNMTP40261 264 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 ARL4AP40617 200 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 CDKN2BP42772 138 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 SERPINH1P50454 418 aaKnown RBP6.84□□□□□ -1.31
VPS52-219ENST00000493379 CDH6P55285 790 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 ST8SIA6P61647 398 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 KIF5AQ12840 1032 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 BYSLQ13895 437 aaKnown RBP6.84□□□□□ -1.31
VPS52-219ENST00000493379 SEPT6Q14141 434 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 ELAVL3Q14576 367 aaKnown RBP6.84□□□□□ -1.31
VPS52-219ENST00000493379 RFTN1Q14699 578 aaPredicted RBP6.84□□□□□ -1.31
VPS52-219ENST00000493379 DLG2Q15700 870 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 ANKRD20A8PQ5CZ79 823 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 RNFT1Q5M7Z0 435 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 RWDD4Q6NW29 188 aaKnown RBP6.84□□□□□ -1.31
VPS52-219ENST00000493379 SERPINA13PQ6UXR4 307 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 C20orf204Q6ZNR8 217 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 SLCO4C1Q6ZQN7 724 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 USP30Q70CQ3 517 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 TFAP2DQ7Z6R9 452 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 C11orf74Q86VG3 221 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 TMPRSS6Q8IU80 811 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 KATNAL2Q8IYT4 538 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 RCOR2Q8IZ40 523 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 TEX26Q8N6G2 289 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 PCDH20Q8N6Y1 951 aaKnown RBP6.84□□□□□ -1.31
VPS52-219ENST00000493379 NPWQ8N729 165 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 GOLGA6L1Q8N7Z2 621 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 TSTD1Q8NFU3 115 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 OR7D4Q8NG98 312 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 OR2A12Q8NGT7 310 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 FBXO27Q8NI29 283 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 KIAA1524Q8TCG1 905 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 HCAR2Q8TDS4 363 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 CYB5D2Q8WUJ1 264 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 NUDT8Q8WV74 236 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 GAB3Q8WWW8 586 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 HES6Q96HZ4 224 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 LOXL4Q96JB6 756 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 RPL10LQ96L21 214 aaKnown RBP6.84□□□□□ -1.31
VPS52-219ENST00000493379 CPEB1Q9BZB8 566 aaKnown RBP6.84□□□□□ -1.31
VPS52-219ENST00000493379 TSGA10Q9BZW7 698 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 PCED1AQ9H1Q7 454 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 PRORYQ9H606 182 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 ATP13A1Q9HD20 1204 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.84□□□□□ -1.31
VPS52-219ENST00000493379 ETNK2Q9NVF9 386 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 WSB2Q9NYS7 404 aaPredicted RBP6.84□□□□□ -1.31
VPS52-219ENST00000493379 DNAI1Q9UI46 699 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 GDF2Q9UK05 429 aaPredicted RBP6.84□□□□□ -1.31
VPS52-219ENST00000493379 VPS28Q9UK41 221 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 TFR2Q9UP52 801 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 RAD54BQ9Y620 910 aa6.84□□□□□ -1.31
VPS52-219ENST00000493379 EML5Q05BV3 1969 aa6.84□□□□□ -1.32
VPS52-219ENST00000493379 PCNX1Q96RV3 2341 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 CKAP5Q14008 2032 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 MUC22E2RYF6 1773 aaPredicted RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 A0A0U1RQJ8 604 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 A0A1B0GTL3 188 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 TCRBV21S2A2A0A5A6 115 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 CCDC66A2RUB6 948 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 ARHGAP42A6NI28 874 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 CDX4O14627 284 aaPredicted RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 SMAD6O43541 496 aaKnown RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 KRT86O43790 486 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 SYNCRIPO60506 623 aaKnown RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 MAFKO60675 156 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 ZRANB2O95218 330 aaKnown RBP eCLIP6.83□□□□□ -1.32
VPS52-219ENST00000493379 GSRP00390 522 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 EPXP11678 715 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 ZFXP17010 805 aaPredicted RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 AMPD1P23109 780 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 GLDCP23378 1020 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 CCNCP24863 283 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 ABCG1P45844 678 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 NOP2P46087 812 aaKnown RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 NR2C2P49116 596 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 STK19P49842 368 aaPredicted RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 CSRP3P50461 194 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 PAPOLAP51003 745 aaKnown RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 RPS14P62263 151 aaKnown RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 IL10RBQ08334 325 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 GALNT2Q10471 571 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 SLC10A2Q12908 348 aaPredicted RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 HNRNPDQ14103 355 aaKnown RBP6.83□□□□□ -1.32
VPS52-219ENST00000493379 MPP2Q14168 576 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 STARD3Q14849 445 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 CYTH1Q15438 398 aa6.83□□□□□ -1.32
VPS52-219ENST00000493379 PPP2R5EQ16537 467 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms