RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 ITM2BQ9Y287 266 aa17.29■□□□□ 0.36
LIME1-208ENST00000493265 A0A0U1RQS6 177 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 FAM47DPA6NHR8 397 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 UPK3BL1B0FP48 263 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 UPK3BL2E5RIL1 263 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 NEMP1O14524 444 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 FZD6O60353 706 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 ADRB3P13945 408 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 TPH1P17752 444 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 IVDP26440 423 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 ADRA1AP35348 466 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 ABL2P42684 1182 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 FNTBP49356 437 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 ITGA8P53708 1063 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 ZBTB16Q05516 673 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 TRADDQ15628 312 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 SLC1A5Q15758 541 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 QPCTQ16769 361 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 UGP2Q16851 508 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 GLE1Q53GS7 698 aaKnown RBP17.28■□□□□ 0.36
LIME1-208ENST00000493265 NAPEPLDQ6IQ20 393 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 OR52K1Q8NGK4 314 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 OR14C36Q8NHC7 312 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 PIH1D2Q8WWB5 315 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 HDAC8Q9BY41 377 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 EPB41L5Q9HCM4 733 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 PCDH12Q9NPG4 1184 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.28■□□□□ 0.36
LIME1-208ENST00000493265 DMGDHQ9UI17 866 aaKnown RBP17.28■□□□□ 0.36
LIME1-208ENST00000493265 GGT7Q9UJ14 662 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 ANAPC5Q9UJX4 755 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 GMEB2Q9UKD1 530 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 CDV3Q9UKY7 258 aaKnown RBP17.28■□□□□ 0.36
LIME1-208ENST00000493265 PHTF1Q9UMS5 762 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 SCML1Q9UN30 329 aa17.28■□□□□ 0.36
LIME1-208ENST00000493265 V9GYY5 206 aaPredicted RBP17.28■□□□□ 0.36
LIME1-208ENST00000493265 LOC285095A0A1B0GVY8 99 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 TSPAN11A1L157 253 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 GOLGA8CPA6NN73 597 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 ERI2A8K979 691 aaKnown RBP17.27■□□□□ 0.36
LIME1-208ENST00000493265 AXIN1O15169 862 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 TMEM63AO94886 807 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 SLC4A1P02730 911 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 ATXN1LP0C7T5 689 aaKnown RBP17.27■□□□□ 0.36
LIME1-208ENST00000493265 TPSB2P20231 275 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 SFSWAPQ12872 951 aaKnown RBP17.27■□□□□ 0.36
LIME1-208ENST00000493265 CALCOCO2Q13137 446 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 TPSAB1Q15661 275 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 PIP5KL1Q5T9C9 394 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 RNASEH2BQ5TBB1 312 aaKnown RBP17.27■□□□□ 0.36
LIME1-208ENST00000493265 AGBL4Q5VU57 503 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 DENND2CQ68D51 928 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 DUPD1Q68J44 220 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 ERAP2Q6P179 960 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 RANBP10Q6VN20 620 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 MAMSTRQ6ZN01 415 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 PCGF5Q86SE9 256 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 LINC00523Q86TU6 105 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 RASSF3Q86WH2 238 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 NDUFAF2Q8N183 169 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 FAM160A2Q8N612 972 aaPredicted RBP17.27■□□□□ 0.36
LIME1-208ENST00000493265 FRMD1Q8N878 549 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 HCAR2Q8TDS4 363 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 CNTNAP3BQ96NU0 1288 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 CNTNAP3Q9BZ76 1288 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 PARD6AQ9NPB6 346 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 ITM2CQ9NQX7 267 aa17.27■□□□□ 0.36
LIME1-208ENST00000493265 EIF2B3Q9NR50 452 aaKnown RBP17.27■□□□□ 0.36
LIME1-208ENST00000493265 A0A1W2PQ67 120 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 ANKRD66B4E2M5 251 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 SEC31AO94979 1220 aaKnown RBP17.26■□□□□ 0.35
LIME1-208ENST00000493265 PAPSS2O95340 614 aaPredicted RBP17.26■□□□□ 0.35
LIME1-208ENST00000493265 FGF1P05230 155 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 TDGF1P13385 188 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 HLA-DPA1P20036 260 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 SDHBP21912 280 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 HNF1BP35680 557 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 GRIA4P48058 902 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 SESN2P58004 480 aaPredicted RBP17.26■□□□□ 0.35
LIME1-208ENST00000493265 RPL26P61254 145 aaKnown RBP17.26■□□□□ 0.35
LIME1-208ENST00000493265 CCDC15Q0P6D6 951 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 USP45Q70EL2 814 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 KBTBD6Q86V97 674 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 KLHDC8BQ8IXV7 354 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 NAT8LQ8N9F0 302 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 BLOC1S5Q8TDH9 187 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 IFT81Q8WYA0 676 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 WRAP53Q9BUR4 548 aaKnown RBP17.26■□□□□ 0.35
LIME1-208ENST00000493265 FAM126AQ9BYI3 521 aaPredicted RBP17.26■□□□□ 0.35
LIME1-208ENST00000493265 B4GALT6Q9UBX8 382 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 RAB23Q9ULC3 237 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 RPL26L1Q9UNX3 145 aaKnown RBP17.26■□□□□ 0.35
LIME1-208ENST00000493265 SHOC2Q9UQ13 582 aa17.26■□□□□ 0.35
LIME1-208ENST00000493265 CACNA1BQ00975 2339 aa17.25■□□□□ 0.35
LIME1-208ENST00000493265 A0A0J9YYE9 177 aa17.25■□□□□ 0.35
LIME1-208ENST00000493265 DCDC2BA2VCK2 349 aa17.25■□□□□ 0.35
LIME1-208ENST00000493265 NPIPB15A6NHN6 443 aaPredicted RBP17.25■□□□□ 0.35
LIME1-208ENST00000493265 PRR5-ARHGAP8B1AHC4 643 aa17.25■□□□□ 0.35
LIME1-208ENST00000493265 SUN1O94901 812 aa17.25■□□□□ 0.35
LIME1-208ENST00000493265 PCDH8O95206 1070 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms