RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ARL14Q8N4G2 192 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 NETO2Q8NC67 525 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 HAUS2Q9NVX0 235 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 MYO1AQ9UBC5 1043 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 KLQ9UEF7 1012 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 IP6K2Q9UHH9 426 aa12.53□□□□□ -0.4
COL6A1-205ENST00000492851 CHD5Q8TDI0 1954 aa12.52□□□□□ -0.4
COL6A1-205ENST00000492851 TRPM6Q9BX84 2022 aa12.52□□□□□ -0.4
COL6A1-205ENST00000492851 CAPN8A6NHC0 703 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 ZW10O43264 779 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 ATMINO43313 823 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-205ENST00000492851 RECQL5O94762 991 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-205ENST00000492851 CDH6P55285 790 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 KIAA1024LP59773 190 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 TLE3Q04726 772 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 EIF3IQ13347 325 aaKnown RBP12.52□□□□□ -0.41
COL6A1-205ENST00000492851 PEX6Q13608 980 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 DPYSQ14117 519 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 SPIDRQ14159 915 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 ZNF235Q14590 738 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 ALG11Q2TAA5 492 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 CAVIN1Q6NZI2 390 aaKnown RBP12.52□□□□□ -0.41
COL6A1-205ENST00000492851 LIPIQ6XZB0 460 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 DPPA4Q7L190 304 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 RD3Q7Z3Z2 195 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 SLC35F3Q8IY50 421 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 OR56A4Q8NGH8 313 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 WDR36Q8NI36 951 aaKnown RBP12.52□□□□□ -0.41
COL6A1-205ENST00000492851 TEKT4Q8WW24 435 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 TSACCQ96A04 125 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-205ENST00000492851 HIC2Q96JB3 615 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 NAP1L5Q96NT1 182 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-205ENST00000492851 SLC46A1Q96NT5 459 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 FCRL3Q96P31 734 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-205ENST00000492851 PEBP4Q96S96 227 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 RBM15Q96T37 977 aaKnown RBP eCLIP12.52□□□□□ -0.41
COL6A1-205ENST00000492851 CCDC3Q9BQI4 270 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.52□□□□□ -0.41
COL6A1-205ENST00000492851 CLPBQ9H078 707 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 TCEAL2Q9H3H9 227 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-205ENST00000492851 RCOR3Q9P2K3 495 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-205ENST00000492851 GULP1Q9UBP9 304 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 PHTF1Q9UMS5 762 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 COQ6Q9Y2Z9 468 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 OR1A2Q9Y585 309 aa12.52□□□□□ -0.41
COL6A1-205ENST00000492851 TRAFD1O14545 582 aaPredicted RBP12.51□□□□□ -0.41
COL6A1-205ENST00000492851 SERPING1P05155 500 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 PCCBP05166 539 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 SKILP12757 684 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 PNLIPP16233 465 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 CES1P23141 567 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 TRIM23P36406 574 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 RGRP47804 291 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 TMPRSS3P57727 454 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 CCDC173Q0VFZ6 552 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 IQCB1Q15051 598 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 TDRD12Q587J7 1177 aaKnown RBP12.51□□□□□ -0.41
COL6A1-205ENST00000492851 MARC1Q5VT66 337 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 POLNQ7Z5Q5 900 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 SPACA3Q8IXA5 215 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 NIPA2Q8N8Q9 360 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 KCNE4Q8WWG9 221 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 NUDCD1Q96RS6 583 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 STRADBQ9C0K7 418 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL6A1-205ENST00000492851 LCMT1Q9UIC8 334 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 GPR34Q9UPC5 381 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 ENTPD2Q9Y5L3 495 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 URB1O60287 2271 aaKnown RBP12.51□□□□□ -0.41
COL6A1-205ENST00000492851 ZFYVE26Q68DK2 2539 aa12.51□□□□□ -0.41
COL6A1-205ENST00000492851 CCDC187A0A096LP49 1063 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 GOLGA6L19H0YKK7 550 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 MYO1FO00160 1098 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 PSMD11O00231 422 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 ATXN7O15265 892 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-205ENST00000492851 HTRA2O43464 458 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-205ENST00000492851 RARAP10276 462 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 CYP2A6P11509 494 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-205ENST00000492851 GLB1P16278 677 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 UBASH3AP57075 661 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 ZBED6P86452 979 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 SLC10A7Q0GE19 358 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 RALGDSQ12967 914 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 ACOX1Q15067 660 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 HADHQ16836 314 aaKnown RBP12.5□□□□□ -0.41
COL6A1-205ENST00000492851 C3orf38Q5JPI3 329 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 PERM1Q5SV97 790 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 PNCKQ6P2M8 343 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 OGFOD3Q6PK18 319 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 CYP4V2Q6ZWL3 525 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-205ENST00000492851 ZSWIM9Q86XI8 627 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 ATPAF2Q8N5M1 289 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 NPWQ8N729 165 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 HSPH1Q92598 858 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 FUBP1Q96AE4 644 aaKnown RBP12.5□□□□□ -0.41
COL6A1-205ENST00000492851 TMEM159Q96B96 161 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 ATXN7L3BQ96GX2 97 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 TMEM74Q96NL1 305 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 CSPG4P5Q96PW8 444 aa12.5□□□□□ -0.41
COL6A1-205ENST00000492851 GFM1Q96RP9 751 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms