RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 TRIM11Q96F44 468 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 CRELD1Q96HD1 420 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 EXOC2Q96KP1 924 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 RBM15Q96T37 977 aaKnown RBP eCLIP8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 WRAP53Q9BUR4 548 aaKnown RBP8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 APOOQ9BUR5 198 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 SLC13A1Q9BZW2 595 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 ATP13A3Q9H7F0 1226 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 POLR1BQ9H9Y6 1135 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 MRPL47Q9HD33 250 aaKnown RBP8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 PPIL1Q9Y3C6 166 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 PCDHGA8Q9Y5G5 932 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 ENTPD2Q9Y5L3 495 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 BZW2Q9Y6E2 419 aaKnown RBP8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 SCINQ9Y6U3 715 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 KALRNO60229 2985 aa8.43□□□□□ -1.06
SMARCB1-207ENST00000491967 SMG1Q96Q15 3661 aaKnown RBP8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 CDRT15L2A8MXV6 281 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 TMCO5BA8MYB1 307 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 RRP8O43159 456 aaKnown RBP8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 MAFKO60675 156 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 USP12O75317 370 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 RECQL5O94762 991 aaPredicted RBP8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 RASGRP1O95267 797 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 CYP1A2P05177 515 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 ANXA6P08133 673 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 SKILP12757 684 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 SERPINA4P29622 427 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 RPIAP49247 311 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 RENBPP51606 427 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 ARSEP51690 589 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 SRP54P61011 504 aaKnown RBP8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 POLR2LP62875 67 aaKnown RBP8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 SLC25A11Q02978 314 aaKnown RBP8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 C1orf61Q13536 156 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 ELOCQ15369 112 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 FAXCQ5TGI0 409 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 TXNRD3NBQ6F5E7 133 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 ERAP2Q6P179 960 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 NYAP1Q6ZVC0 841 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 C17orf82Q86X59 251 aaPredicted RBP8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 ZNF354CQ86Y25 554 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 LRRC49Q8IUZ0 686 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 SPACA3Q8IXA5 215 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 PGBD5Q8N414 524 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 TEX26Q8N6G2 289 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 PLA2G15Q8NCC3 412 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 GPR156Q8NFN8 814 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 FATE1Q969F0 183 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 COQ10AQ96MF6 247 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 SLC46A1Q96NT5 459 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 CSPG4P5Q96PW8 444 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 UBL7Q96S82 380 aaPredicted RBP8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 MGME1Q9BQP7 344 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 ABCG4Q9H172 646 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 ETNK2Q9NVF9 386 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 SEPT3Q9UH03 358 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 PADI4Q9UM07 663 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 COQ6Q9Y2Z9 468 aa8.42□□□□□ -1.06
SMARCB1-207ENST00000491967 ZFC3H1O60293 1989 aaKnown RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 A0A1W2PQ67 120 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 CPED1A4D0V7 1026 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 H3BRJ5 948 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 CASC3O15234 703 aaKnown RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 ATXN7O15265 892 aaPredicted RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 SOCS5O75159 536 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 SERPING1P05155 500 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 MPOP05164 745 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 CELA2BP08218 269 aaPredicted RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 ALPIP09923 528 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 RARAP10276 462 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 PNLIPP16233 465 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 XPAP23025 273 aaPredicted RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 AMPD1P23109 780 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 TEAD1P28347 426 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 HNRNPH3P31942 346 aaKnown RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 GABREP78334 506 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 BCL2L1Q07817 233 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 LBRQ14739 615 aaKnown RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 PPP6R3Q5H9R7 873 aaPredicted RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 ALG1LQ6GMV1 187 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 ESRP1Q6NXG1 681 aaKnown RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 PNCKQ6P2M8 343 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 PCSK4Q6UW60 755 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 LRRC69Q6ZNQ3 347 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 RBM44Q6ZP01 1051 aaKnown RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 CLEC14AQ86T13 490 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 ARL10Q8N8L6 244 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 ZNF248Q8NDW4 579 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 ATL2Q8NHH9 583 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 OR1E3Q8WZA6 343 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 GLMNQ92990 594 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 TSACCQ96A04 125 aaPredicted RBP8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 ZNF653Q96CK0 615 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 IQCDQ96DY2 449 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 ATXN7L3BQ96GX2 97 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 WDR92Q96MX6 357 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 DCBLD2Q96PD2 775 aa8.41□□□□□ -1.06
SMARCB1-207ENST00000491967 MCCC1Q96RQ3 725 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms